Monthly Archives: November 2012

Available PhD Research Project – RNA-Seq

Available PhD Research Project – RNA-Seq

Statistical analysis of RNA-seq data from next-generation sequencing experiments of cancer. Institution: Queen’s University Belfast Dept/School/Faculty: School of Medicine, Dentistry & Biomedical Sciences PhD Supervisor: Dr F Emmert-Streib Co-Supervisor: Prof M Salto-Tellez Application Deadline: 25 January 2013 Genomics data generated ...

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A Guide to the Epigenome

by Jeffrey M. Perkel at The Scientist September was a monumental month for genome aficionados. The National Human Genome Research Institute (NHGRI)–funded Encyclopedia of DNA Elements (ENCODE) Project released 30 papers in the pages of Nature, Genome Biology, Genome Research, ...

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Featured Job Listing – Global Lead – NGS Core

Featured Job Listing – Global Lead – NGS Core

Job ID 107527BR Posting Title Global Lead – NGS Core Division Novartis Institutes for BioMedical Research (NIBR) Business Unit Research Cambridge Country USA Work Location Cambridge, MA Company/Legal Entity USA Novartis Institutes for BioMedical Research, Inc., Cambridge, MA Functional Area ...

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RNA-Seq Analysis Survey

this was originally posted on the SEQanswers forum by bodhisattvax I am looking to build a ‘standard’ RNA-seq data analysis pipeline for analysing differential gene and possibly transcript expression. I am aware that there are a variety of tools out ...

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RNA-Seq Blog Poll Results

We asked: Which candidate would you vote for in the upcoming U.S. presidential election? We closed this poll just before the actual election results were revealed so as not to influence our own poll.  Looks like Barack Obama wins again, ...

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RNA-SEQ Workshop – Life Technologies

RNA-seq from Isolation to Analysis. Speaker. Fabio Raffaldi, Sr FAS Ion Torrent / SOLiD + RNA ESPOC. Kelli Bramlett – Life/Ambion R&D. Tom Bittick Life/AmbionProduct Management

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Intron-Centric Estimation of Alternative Splicing from RNA-seq data

Novel technologies brought in unprecedented amounts of high-throughput sequencing data along with great challenges in their analysis and interpretation. The percent-spliced-in (PSI, Ψ) metric estimates the incidence of single-exon skipping events and can be computed directly by counting reads that ...

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