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Massive computing contest won with RNA-Seq data analysis

Massive computing contest won with RNA-Seq data analysis

The winner of the Big Science Challenge, a contest convened last year by Cycle Computing to provide $10,000 in cloud computing resources for groundbreaking biomedical research, has successfully completed the first phase of its project while logging more than 115 ...

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RNA-seq Coverage Effects on Biological Pathways and GO Tag Clouds

RNA-seq Coverage Effects on Biological Pathways and GO Tag Clouds

Researchers at National Taiwan Ocean University and National Tsing Hua University, Taiwan proposed a workflow which integrated annotations from KEGG biological pathways and Gene Ontology associations for manipulating multiple RNA-seq datasets. The developed system started from mapping short reads onto ...

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Cloud Based Solutions – a Trend for RNA-Seq Data Analysis

Cloud Based Solutions – a Trend for RNA-Seq Data Analysis

RNA-Seq is becoming the tool of choice for gene expression studies, as it can facilitate the investigation of phenomena beyond the reach of traditional microarrays, such as novel transcripts and isoforms, alternative splice sites, and allele-specific expression. However, this increased power ...

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Free & Open Environment for RNA-seq analysis: Galaxy

Free & Open Environment for RNA-seq analysis: Galaxy

The Galaxy Team announced yesterday that the first free public resource for RNA-seq analysis is now available through the Galaxy public server at http://usegalaxy.org . Galaxy now supports both Tophat and Cufflinks and also provides useful utilities for manipulating and ...

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