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The Sorghum Transcriptome Database

The Sorghum Transcriptome Database

In transcriptome analysis, accurate annotation of each transcriptional unit and its expression profile is essential. A full-length cDNA (FL-cDNA) collection facilitates the refinement of transcriptional annotation and accurate transcription start sites help to unravel transcriptional regulation. Researchers at the RIKEN ...

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Newly aligned modENCODE RNA-Seq coverage data

Newly aligned modENCODE RNA-Seq coverage data

Sue Celniker’s group has provided FlyBase with updated RNA-Seq coverage data for the modENCODE transcriptome datasets. The high-throughput sequencing reads from these experiments have been re-aligned to the new BDGP Release 6 reference genome assembly (NCBI accession GCA_000001215.4). This update ...

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MeT-DB: a database of transcriptome methylation in mammalian cells

MeT-DB: a database of transcriptome methylation in mammalian cells

Methyltranscriptome is an exciting new area that studies the mechanisms and functions of methylation in transcripts. The MethylTranscriptome DataBase is the first comprehensive resource for N6-methyladenosine (m6A) in mammalian transcriptome. It includes a database that records publicaly available data sets ...

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