Expression and Quantification

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Rcount – simple and flexible RNA-Seq read counting

Rcount – simple and flexible RNA-Seq read counting

Analysis of differential gene expression by RNA sequencing (RNA-Seq) is frequently done using feature counts, i.e. the number of reads mapping to a gene. However, commonly used count algorithms (e.g. HTSeq) do not address the problem of reads aligning with ...

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Methods for Joint Imaging and RNA-seq Data Analysis

Methods for Joint Imaging and RNA-seq Data Analysis

Emerging integrative analysis of genomic and anatomical imaging data which has not been well developed, provides invaluable information for the holistic discovery of the genomic structure of disease and has the potential to open a new avenue for discovering novel ...

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