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SCOPE++ : Sequence Classification Of homoPolymer Emissions

SCOPE++ : Sequence Classification Of homoPolymer Emissions

mRNA polyadenylation, the addition of a poly(A) tail to the 3′-end of pre-mRNA, is a process critical to gene expression and regulation in eukaryotes. To understand the molecular mechanisms governing polyadenylation and other relevant biological processes, it is important to ...

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GeneMark-ET – gene finding algorithm for eukaryotic genomes

GeneMark-ET – gene finding algorithm for eukaryotic genomes

Researchers at Georgia Tech present a new approach to automatic training of a eukaryotic ab initio gene finding algorithm. With the advent of Next-Generation Sequencing, automatic training has become paramount, allowing genome annotation pipelines to keep pace with the speed ...

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SnowyOwl: accurate prediction of fungal genes by using RNA-Seq

SnowyOwl: accurate prediction of fungal genes by using RNA-Seq

Locating the protein-coding genes in novel genomes is essential to understanding and exploiting the genomic information but it is still difficult to accurately predict all the genes. The recent availability of detailed information about transcript structure from high-throughput sequencing of ...

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