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RNA-Seq Alignment and Visualization

RNA-Seq Alignment and Visualization

Canadian Bioinformatics Workshops – Informatics for RNA-sequence Analysis (QC) (2014) – Module 2 – RNA-seq alignment and visualization High-throughput sequencing of RNA libraries (RNA-seq) has become increasingly common and largely supplanted gene microarrays for transcriptome profiling. When processed appropriately, RNA-seq ...

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Introduction to RNA-Seq Analysis

Introduction to RNA-Seq Analysis

Introduction to RNA-Seq Analysis – Vincent Plagnol UCL Part of the Intel-Crick NGS workshop – Computational Challenges and Performance Optimizations in NGS data analysis

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NGS Infographic

NGS Infographic

This past April marked the 10-year anniversary of the release of the first human genome reference sequence, an epic milestone in the annals of medical science.  The use of “first-generation sequencing” required over a decade and almost $3 billion. Today’s ...

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The Evolution of RNA-Sequencing

The Evolution of RNA-Sequencing

Click here to register for free and to view the entire webinar: http://xtalks.com/genomic-know-how.as… Although RNA-Seq is a relatively new methodology, with some of the first transcriptome-wide analyses appearing around 2008, RNA-Seq has rapidly evolved to become a standard assay for ...

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Overcoming bias and batch effects in RNA-Seq data

Overcoming bias and batch effects in RNA-Seq data

Rafael Irizarry – from Dana-FarberVideo From 15w5142: Statistical and Computational Challenges In Bridging Functional Genomics, Epigenomics, Molecular QTLs, and Disease Genetics    Rafael Irizarry – Dana-Farber – Overcoming bias and batch effects in RNA-Seq data Video From 15w5142: Statistical and ...

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Single-cell RNA-Seq profiling identified molecular signatures and transcriptional networks regulating lung maturation

Single-cell RNA-Seq profiling identified molecular signatures and transcriptional networks regulating lung maturation

Yan Xu – Associate Professor – Cincinnati Children’s Hospital Medical Center Single-cell RNA-seq profiling identified molecular signatures and transcriptional networks regulating lung maturation 2nd International Conference on Genomics & Pharmacogenomics September 08-10, 2014 Double Tree by Hilton Hotel Raleigh-Brownstone-University, USA ...

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RNA-Seq analysis in SeqMonk with DESeq

RNA-Seq analysis in SeqMonk with DESeq

This video shows a walk-through of a full 2-condition, 3-replicate RNA-Seq experiment, from loading the data, through QC, quantitation and differential expression analysis using both DESeq2 and SeqMonk’s own Intensity Difference filter. http://www.bioinformatics.babraham.ac.uk/projects/seqmonk/

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