Analysis Pipelines

Benchmarking of RNA-Seq analysis workflows

rna-seq

RNA-sequencing has become the gold standard for whole-transcriptome gene expression quantification. Multiple algorithms have been developed to derive gene counts from sequencing reads. While a number of benchmarking studies have been conducted, the question remains how individual methods perform at ...

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CSBB-v2.0 is released and available for download

rna-seq

Download CSBB-v2.0 for free! Computational Suite for Bioinformaticians and Biologists https://sourceforge.net/projects/csbb-v2-0/ What’s New: 1) Install module for Linux and MAC users → this module will auto install all the required dependencies for running RNA-SEQ pipelines using CSBB 2) Ability to ...

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Public RNA-Seq Data Analysis using WebMeV

rna-seq

In genomics and computational biology. there is too often a divide between those who generate the data and those who analyze it. A physician scientist treating ovarian cancer patients will approach the analysis of ovarian cancer gene expression data with ...

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