DEXSeq – Inference of differential expression and splicing in RNA-Seq

The package is focused on finding differential exon usage using RNA-seq exon counts from samples with different experimental designs. It provides functions that allows the user to make the necessary statistical tests based on a model that uses the negative binomial distribution to estimate the variance between biological replicates. The package also provides functions for the visualization and exploration of the results.

The software is available at:

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