RNA-Seq Datasets Improving Genome Annotation in Plants, Animals, Bacteria

Tisserant E, Da Silva C, Kohler A, Morin E, Wincker P, Martin F. (2011) Deep RNA sequencing improved the structural annotation of the Tuber melanosporum transcriptome. New Phytol 189(3), 883-91. [abstract]

Mizrachi E, Hefer CA, Ranik M, Joubert F, Myburg AA. (2010) De novo assembled expressed gene catalog of a fast-growing Eucalyptus tree produced by Illumina mRNA-Seq. BMC Genomics 11, 681. [abstract]

Coleman SJ, Zeng Z, Wang K, Luo S, Khrebtukova I, Mienaltowski MJ, Schroth GP, Liu J, MacLeod JN. (2010) Structural annotation of equine protein-coding genes determined by mRNA sequencing. Anim Genet 41(Suppl 2), 121-30. [abstract]

Martin J, Zhu W, Passalacqua KD, Bergman N, Borodovsky M. (2010) Bacillus anthracis genome organization in light of whole transcriptome sequencing. BMC Bioinformatics 11(Suppl 3), S10. [abstract]