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The GATK Best Practices for variant calling on RNAseq

The GATK Best Practices for variant calling on RNAseq

by Geraldine_VdAuwera at GATK Best Practices workflow for RNAseq This workflow is intended to be run per-sample; joint calling on RNAseq is not supported yet, though that is on our roadmap. Please see the new document here for full details ...

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Past RNA-Seq Workshops – The Broad Institute

Past RNA-Seq Workshops – The Broad Institute

De novo & Genome-guided Transcript Reconstruction from RNA-Seq Participants in this workshop will learn the basics of how to reconstruct and analyze transcriptomes starting from RNA-Seq data using genome-guided and genome-free methods. Genome-guided reconstruction will be performed using the Tuxedo ...

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RNA-seq QC in GenePattern

RNA-seq QC in GenePattern

This tutorial covers common quality control metrics that can be used for evaluating aligned RNA-seq data files in GenePattern

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Genotype-Tissue Expression Project Community Meeting

Genotype-Tissue Expression Project Community Meeting

The goal of the first GTEx Project Community Meeting is to share information about the project and to showcase advances made during the project’s initial pilot phase. In addition to describing the project’s current status and goals during the upcoming ...

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Job Opening – Computational Biologist – RNA-Seq

Requisition Number: 790 Job Title: Computational Biologist, RNA-Seq Area of Interest: Computational Biology City: Cambridge State/Province: Massachusetts Job Description: The role of this researcher will be to develop and apply new and existing computational methods, interpret results within a biological ...

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