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systemPipeR – NGS workflow and report generation environment

systemPipeR – NGS workflow and report generation environment

Next-generation sequencing (NGS) has revolutionized how research is carried out in many areas of biology and medicine. However, the analysis of NGS data remains a major obstacle to the efficient utilization of the technology, as it requires complex multi-step processing ...

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June 2016 Galaxy RNA-Seq and ChIP-Seq Workshop

June 2016 Galaxy RNA-Seq and ChIP-Seq Workshop

Using Galaxy for Analysis of RNA-Seq and ChIP-Seq Data Organizer – Bioinformatics Core June 13, 2016, 9 a.m. – June 17, 2016, 5 p.m. This workshop will include a rich collection of lectures and hands-on sessions, covering both theory and ...

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RNA stability is an important determinant of eventual transcript levels

RNA stability is an important determinant of eventual transcript levels

Histone epigenome data determined by chromatin immunoprecipitation sequencing (ChIP-seq) is used in identifying transcript regions and estimating expression levels. However, this estimation does not always correlate with eventual RNA expression levels measured by RNA sequencing (RNA-seq). Part of the inconsistency ...

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