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Quantitative Transcriptome Analysis Using RNA-seq

Quantitative Transcriptome Analysis Using RNA-seq

RNA-seq has emerged as the technology of choice to quantify gene expression. This technology is a convenient accurate tool to quantify diurnal changes in gene expression, gene discovery, differential use of promoters, and splice variants for all genes expressed in ...

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Benchmarking RNA-Seq quantification tools

RNA-Seq, a deep sequencing technique, promises to be a potential successor to microarrays for studying the transcriptome. One of many aspects of transcriptomics that are of interest to researchers is gene expression estimation. With rapid development in RNA-Seq, there are ...

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Cuffdiff update for differential expression analysis of RNA-Seq data

Differential analysis of gene and transcript expression using high-throughput RNA sequencing (RNA-seq) is complicated by several sources of measurement variability and poses numerous statistical challenges. A team led by researchers at the University of California Berkeley has released and update ...

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