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RNA-seq data analysis workshop

RNA-seq data analysis workshop

This international workshop covers several aspects of RNA-seq data analysis, ranging from quality control, assembly and alignment to differential expression analysis and miRNA-mRNA integration. Particular emphasis is given to comparison of different analysis tools. The program consists of two lecture ...

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For classification- use the highest possible coverage

A key goal of systems biology and translational genomics is to utilize high-throughput measurements of cellular states to develop expression-based classifiers for discriminating among different phenotypes. Recent developments of Next Generation Sequencing (NGS) technologies can facilitate classifier design by providing ...

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Calculating Sample Size Estimates for RNA Sequencing Data

Calculating Sample Size Estimates for RNA Sequencing Data

Given the high technical reproducibility and orders of magnitude greater resolution than microarrays, next-generation sequencing of mRNA (RNA-Seq) is quickly becoming the de facto standard for measuring levels of gene expression in biological experiments. Two important questions must be taken ...

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Introductory Course – The Power of RNA-seq

Introductory Course – The Power of RNA-seq

General info Date - 05 Jun 2013 - 07 Jun 2013  Location – Wageningen, the Netherlands Keywords – RNA-seq, transcriptome, experimental design, statistics, data analysis, mapping, quantification, differential expression, interpretation, pathways Organiser – Experimental Plant Sciences (EPS, Wageningen UR) & NBIC Teacher(s) ...

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MMAPPR – Mutation Mapping Analysis Pipeline for Pooled RNA-seq

Forward genetic screens in model organisms are vital for identifying novel genes essential for developmental or disease processes. One drawback of these screens is the labor-intensive and sometimes inconclusive process of mapping the causative mutation. In order to leverage high-throughput ...

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RNA-Seq Data Analysis Webinar

RNA-Seq Data Analysis Webinar

Learn How to Analyze RNA-Seq Data Learn about best practices using statistics to find biological meaning in your RNA-Seq analysis. In this webinar we will discuss: - Statistical considerations for RNA-Seq - Incorporating statistical robustness in your pathway and gene ...

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