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RNAbrowse: RNA-Seq De Novo Assembly Results Browser

RNAbrowse: RNA-Seq De Novo Assembly Results Browser

Transcriptome analysis based on a de novo assembly of next generation RNA sequences is now performed routinely in many laboratories. The generated results, including contig sequences, quantification figures, functional annotations and variation discovery outputs are usually bulky and quite diverse. ...

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Wheat transcriptome assembly using short-read RNA-Seq data

For non-model organisms lacking well-defined genomes, de novo assembly is typically required for downstream RNA-Seq analyses, including SNP discovery and identification of genes differentially expressed by phenotypes. Although RNA-Seq has been successfully used to sequence many non-model organisms, the results ...

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