Tag Archives: differential expression

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Integrating gene expression profiles across different platforms

Integrating gene expression profiles across different platforms

Determining differentially expressed genes (DEGs) between biological samples is the key to understand how genotype gives rise to phenotype. RNA-seq and microarray are two main technologies for profiling gene expression levels. However, considerable discrepancy has been found between DEGs detected ...

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(Post) Graduate Course ‘The Power of RNA-Seq’

(Post) Graduate Course ‘The Power of RNA-Seq’

Date: February 10th-12th, 2016 Location: Room PC95 (first floor), RADIX building (107), Wageningen Campus, Droevendaalsesteeg 1, Wageningen, the Netherlands Directions: directions (check also Map Wageningen UR Campus) Language: English Group size: maximum of 35 participants Credits: 0.8 ECTS Registration and ...

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Does gene length effect variance estimation of RNA-Seq read counts?

Does gene length effect variance estimation of RNA-Seq read counts?

Next-generation sequencing technologies are widely used in genome research, and RNA sequencing (RNA-Seq) is becoming the main application for gene expression profiling. A large number of computational methods have been developed for analyzing differentially expressed (DE) genes in RNA-Seq data. ...

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www.rnaseq.wiki

www.rnaseq.wiki

Massively parallel RNA sequencing (RNA-seq) has rapidly become the assay of choice for interrogating RNA transcript abundance and diversity. This article provides a detailed introduction to fundamental RNA-seq molecular biology and informatics concepts. The authors make available open-access RNA-seq tutorials ...

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