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shRNA-seq data analysis with edgeR

shRNA-seq data analysis with edgeR

Pooled short hairpin RNA sequencing (shRNA-seq) screens are becoming increasingly popular in functional genomics research, and there is a need to establish optimal analysis tools to handle such data. This open-source shRNA processing pipeline in edgeR provides a complete analysis ...

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Bioinformatics – Next Gen Sequencing – Virtual Issue

Bioinformatics has published a Next-Gen Sequencing “Virtual Issue” covering all the sequencing tools that appeared in the journal.  We have listed those described as applicable to RNA-Seq. Statistical Inferences for Isoform Expression in RNA-Seq. Hui Jiang and Wing Wong Bioinformatics ...

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