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The Ensembl gene annotation system

The Ensembl gene annotation system

The Ensembl gene annotation system has been used to annotate over 70 different vertebrate species across a wide range of genome projects. Furthermore, it generates the automatic alignment-based annotation for the human and mouse GENCODE gene sets. The system is ...

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Impact of gene annotation on RNA-Seq data analysis

Impact of gene annotation on RNA-Seq data analysis

RNA-Seq has become increasingly popular in transcriptome profiling. One aspect of transcriptome research is to quantify the expression levels of genomic elements, such as genes, their transcripts and exons. Acquiring a transcriptome expression profile requires genomic elements to be defined ...

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Ensembl 74 has been released!

Ensembl 74 has been released!

from the Ensembl Blog What’s new in e!74? Updated human GENCODE release 19 and mouse GENCODE release M2 gene sets including manual annotation from Havana New assembly patches for human (GRCh37.p13) and mouse (GRCm38.p2) dbSNP Build 138 data for human, mouse and cow ...

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RNA-Seq in the Ensembl Genebuild

What are the RNA-Seq models in Ensembl, and how were they determined? How does RNA-Seq data contribute to Ensembl gene sets? Can I upload my own RNA-Seq data to Ensembl? Answers to these questions and more…

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