JHU Researchers Launch “recount,” the Largest Summarized Collection of Human RNA Sequencing Data to Date

February 2, 2017 Leave a comment 2,458 Views

Public sequencing data archives are growing by petabases — millions of billions of DNA letters — per year. But for typical researchers, using these data requires huge downloads and laborious re-analysis. Most researchers aren’t equipped for this, so valuable data ...

recount – A large-scale resource of analysis-ready RNA-seq expression data

August 16, 2016 1 Comment 4,344 Views

recount is a resource of processed and summarized expression data spanning nearly 60,000 human RNA-seq samples from the Sequence Read Archive (SRA). The associated recount Bioconductor package provides a convenient API for querying, downloading, and analyzing the data. Each processed ...

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JHU Researchers Launch “recount,” the Largest Summarized Collection of Human RNA Sequencing Data to Date

recount – A large-scale resource of analysis-ready RNA-seq expression data

A simple guideline to assess the characteristics of RNA-Seq data

Cellecta, Inc. launches DriverMap™ predesigned RNA-Seq panels and analysis software

Differential gene expression analysis tools exhibit substandard performance for long non-coding RNA-sequencing data

Postdoc position available – cancer and development

Quantifying index switching in single-cell transcriptome sequencing experiments

The unique genetic makeup of myeloma tumor cells revealed by single cell RNA-Seq

Bioinformatician (m/f) (#CFBIO15)

Advantages of single-nucleus over single-cell RNA sequencing of adult kidney