Tag Archives: transcriptome sequencing

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SNP calling from RNA-seq data without a reference genome

SNP calling from RNA-seq data without a reference genome

SNPs (Single Nucleotide Polymorphisms) are genetic markers whose precise identification is a prerequisite for association studies. Methods to identify them are currently well developed for model species, but rely on the availability of a (good) reference genome, and therefore cannot ...

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Transcriptome Sequencing for the Detection of Chimeric Transcripts

Transcriptome Sequencing for the Detection of Chimeric Transcripts

The occurrence of chimeric transcripts has been reported in many cancer cells and seen as potential biomarkers and therapeutic targets. Modern high-throughput sequencing technologies offer a way to investigate individual chimeric transcripts and the systematic information of associated gene expressions ...

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Transcriptome Sequenced – Populus tomentosa

Transcriptome Sequenced – Populus tomentosa

Wood formation affects the chemical and physical properties of wood, and thus affects its utility as a building material or a feedstock for biofuels, pulp and paper. To obtain genome-wide insights on the transcriptome changes and regulatory networks in wood ...

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Could RNA-Seq Become the Workhorse of Precision Medicine?

Could RNA-Seq Become the Workhorse of Precision Medicine?

from Genetic Engineering News by Jeffrey S. Buguliskis, Ph.D. Plowing through Transcriptional Variations by Harnessing the Powerful Next-Gen Technique Advances in genomics over the past several years have had a profound impact on our grasp of molecular biology and genetics. ...

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Integrating transcriptome and genome sequencing

Integrating transcriptome and genome sequencing

A practical webinar highlighting genetic data integration approaches featuring Dr. Tuuli Lappalainen. Explore the power of genome and transcriptome data integration, expand your understanding of genetic variants, and map future research applications.

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