Tag Archives: tutorial

MSI Tutorial: RNA-Seq Analysis

rna-seq

The RNA-Seq analysis tutorial covers the basics of differential expression analysis and touches on other RNA-seq topics such as transcriptome assembly. Topics Covered: RNA-Seq vs Microarray technology Experimental Design Sequencing Technology Data Quality Assessments Mapping RNA-Seq data to a genome ...

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IIHG Intro to Sleuth for RNA-Seq

rna-seq

A brief introduction to the Sleuth R Shiny app for doing exploratory data analysis of your RNA-Seq data. This tutorial assumes that the data have been already quantified with kallisto and processed into a sleuth object with the sleuth r ...

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RNA-Seq Data Preprocessing Tutorial

rna-seq

Check the full description for links to all the resources and the protocol etc. This tutorial follows the Delhomme et al. Epigenesys protocol for RNA sequencing data preprocessing in order to finally perform a differential expression study. To demonstrate, we ...

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RNA-Seq – A Tutorial

rna-seq

A Brief History of Sequencing and Gene Expression. Tag Based Sequencing Approaches Serial Analysis of Gene Expression (SAGE) Cap Analysis of Gene Expression (CAGE) Massively parallel signature sequence (MPSS)

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Upcoming Workshop – Informatics for RNA-Seq

Canadian Bioinformatics Workshop Series Date June 19-20, 2014 – Vancouver, British Columbia Faculty Malachi Griffith and Obi Griffith Course Objectives High-throughput sequencing of RNA libraries (RNA-seq) has become increasingly common and largely supplanted gene microarrays for transcriptome profiling. When processed ...

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An RNA-Seq Tutorial

rna-seq

from the Cheng Lab at UCLA RNA Seq: A (soon to be outdated) Tutorial. A Brief History of Sequencing and Gene Expression. Limitations of Sanger Sequencing. Low throughput. Inconsistent base quality. Expensive. Not quantitative…    

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