Xenome performs fast, accurate and specific classification of xenograft-derived sequence read data. It has been evaluated on RNA-Seq data from human, mouse and human-in-mouse xenograft datasets.
Availability: Xenome is available for non-commercial use from http://www.genomics.csse.unimelb.edu.au/product-xenome.php
Conway T, Wazny J, Bromage A, Tymms M, Sooraj D, Williams ED, Beresford-Smith B. (2012) Xenome–a tool for classifying reads from xenograft samples. Bioinformatics 28(12): i172-i178. [article]