Data Visualization Trees
RNA-Seq Workshop
miRNA Analysis Tool
Bonsai reconstructs tree representations for distortion-free visualization and exploration of high-dimensional data
Bonsai uses tree-based visualization to preserve relationships within high-dimensional RNA sequencing data, helping researchers explore cell populations, developmental pathways, and previously hidden biological patterns...
Free scRNA-seq Data Analysis Workshop
This hands-on course teaches RNA sequencing analysis for single cells, covering quality control, normalization, clustering, annotation, dimensionality reduction, and differential gene expression...
MiRQuery – a user-friendly web app for the interactive analysis and visualization of microRNA sequencing data
MicroRNAs, or miRNAs, are small RNA molecules that help control how genes are expressed. Rather than coding for proteins themselves, miRNAs can bind to ...
Machine learning approaches for biomarker discovery using single-cell RNA sequencing
Single-cell RNA sequencing, or scRNA-seq, allows researchers to measure gene activity in thousands or even millions of individual cells. Instead of averaging gene expression across an entire tissue sample, researchers can examine how different cell types and even individual ...
From bench to bytes: a practical guide to RNA sequencing data analysis
A practical guide helps molecular biologists understand RNA sequencing data analysis, from quality control and normalization to differential expression and biological interpretation...
RNA sequencing resolves cryptic pathogenic variants in mitochondrial disease
Mitochondrial diseases are a diverse group of inherited disorders that interfere with the ability of cells to produce and use energy. Because mitochondria are important in nearly every tissue, these disorders can affect the brain, muscles, heart, liver, and ...
Unlocking the past – new method helps gain insights into old tissue
A book sits atop a table. Although it’s closed, its title, “Encyclopedia of Human Tissue,” promises untold secrets. Perhaps with this book, you can learn about different cell types and what they look like under normal conditions or conditions ...
Tidesurf improves RNA velocity analysis for modern single-cell RNA sequencing
Single-cell RNA sequencing allows researchers to examine gene activity in thousands of individual cells. While a conventional analysis provides a snapshot of each cell at the time it was collected, researchers often want to understand something more dynamic, where ...
Baylor Genetics Webinar to Explore How RNA Sequencing Helps Close Rare Disease Diagnostic Gaps
Baylor Genetics, a clinical diagnostic laboratory at the forefront of genetic testing, announced a GenomeWeb-hosted webinar exploring how RNA Sequencing (RNA-Seq) can help address persistent diagnostic challenges in rare genetic disease. What: Christine Eng, MD, Chief Medical Officer and ...
Bonsai reconstructs tree representations for distortion-free visualization and exploration of high-dimensional data
Bonsai uses tree-based visualization to preserve relationships within high-dimensional RNA sequencing data, helping researchers explore cell populations, developmental pathways, and previously hidden biological patterns...
Free scRNA-seq Data Analysis Workshop
This hands-on course teaches RNA sequencing analysis for single cells, covering quality control, normalization, clustering, annotation, dimensionality reduction, and differential gene expression...
MiRQuery – a user-friendly web app for the interactive analysis and visualization of microRNA sequencing data
MicroRNAs, or miRNAs, are small RNA molecules that help control how genes are expressed. Rather than coding for proteins themselves, miRNAs can bind to messenger RNAs, or mRNAs, and reduce the amount of protein those messages produce. Because a ...
Machine learning approaches for biomarker discovery using single-cell RNA sequencing
Single-cell RNA sequencing, or scRNA-seq, allows researchers to measure gene activity in thousands or even millions of individual cells. Instead of averaging gene expression across an entire tissue sample, researchers can examine how different cell types and even individual ...
From bench to bytes: a practical guide to RNA sequencing data analysis
A practical guide helps molecular biologists understand RNA sequencing data analysis, from quality control and normalization to differential expression and biological interpretation...
RNA sequencing resolves cryptic pathogenic variants in mitochondrial disease
Mitochondrial diseases are a diverse group of inherited disorders that interfere with the ability of cells to produce and use energy. Because mitochondria are important in nearly every tissue, these disorders can affect the brain, muscles, heart, liver, and ...
RNA-Seq Products & Services
JOBS
Senior Product Manager | RNA-seq
About Plasmidsaurus Plasmidsaurus is on a mission to accelerate new cures and promote a healthier planet by unlocking a new level of productivity for scientists. Our sequencing services are used daily by thousands of innovators, including Nobel laureates, Fortune ...
INDUSTRY NEWS
Novogene Europe Expands Single-cell Sequencing Capability at Cambridge Omics Centre
Offers UK academic, biotech and biopharma researchers direct access to specialist project support, 10x Genomics Chromium Single Cell-based workflows, sequencing infrastructure and bioinformatics expertise Novogene Europe, a multiomics research services partner, today announced that it has expanded its single-cell ...
EVENTS
Free scRNA-seq Data Analysis Workshop
This hands-on course teaches RNA sequencing analysis for single cells, covering quality control, normalization, clustering, annotation, dimensionality reduction, and differential gene expression...
RNA-SEQ Forum Feeds
- Bioinformatics Stackexchange
- SEQanswers - RNA Sequencing
I am considering using a hippocampal snRNA-seq atlas as the [...]
Question about snRNA Seq cell type deconvolution Hi everyone, I [...]
as it’s my first time attempting downstream analysis for single [...]
I am a biostatistician who is a newbie to bulk-RNA [...]
I have a question about multimapped reads in small RNA-seq [...]
Why can I not download this plugin: Interference is a [...]
Im currently working with 150bp paired-end sequencing for metatranscriptomics and [...]
I'm pretty new to RNAseq diff. expression analysis etc., and [...]
I have some 3' RNA seq samples (human). I want [...]
does anyone have any recommendations for studying deep learning for [...]
I have a dataset which contains samples which have either [...]
Currently working on a bulk RNA-seq project with two non-model [...]
I am trying to download and prepare RNA-seq data from [...]
Below are the RNA-sequencing results for two different mouse samples [...]
We would like to use bulk RNA-seq for characterizing cell [...]
I performed RNAseq comparing two different populations of CD8+ T [...]
The problem can be solved by simply installing Java, though [...]
I’m aligning paired-end RNA-seq (~150 bp; 461,828 reads) with STAR [...]
I have RNA-seq expression data from in vitro drug-treated samples [...]
I want to download the GSE203206 Alzheimer's dataset from the [...]
RNA-SEQ Data Analysis Tool Collections
Recent RNA-Seq Data Analysis Tools
Bonsai reconstructs tree representations for distortion-free visualization and exploration of high-dimensional data
MiRQuery – a user-friendly web app for the interactive analysis and visualization of microRNA sequencing data
Tidesurf improves RNA velocity analysis for modern single-cell RNA sequencing
New RNA sequencing model improves sequencing depth planning for UMI transcriptomics
MitoClipSplice – machine learning improves RNA sequencing analysis of mitochondrial RNA processing
Machine learning improves RNA sequencing annotation of active genes
NextLongIso – a comprehensive Nextflow pipeline for multi-dimensional long-read RNA-seq analysis
ISAtools improves full-length RNA isoform analysis from long-read RNA sequencing
Deep learning improves cell cycle prediction from single-cell RNA sequencing
MIRACLE keeps single-cell atlases up to date with continual learning
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