Workshop schedule

10/23-25, 9:00 AM-1:00 PM ET

Registration closes 10/16/2024.

About the workshop:

This workshop is targeted toward researchers who would like to better understand the analysis of single-cell RNA-Seq data.

By the end of this workshop, participants will be able to:

• Describe (at a high level) how single-cell samples are sequenced along with strengths of a few popular library preps.
• Create and interpret preliminary QC visualizations from a single-cell experiment.
• Use PCA and UMAP to create cell-type clusters.
• Execute and visualize differential expression across clusters.
• Identify marker genes and annotate clusters based on gene expression.

More details:

• The cost is $390/seat.
• The workshop is entirely online and will be conducted over Zoom and Slack.
• Basic understanding of NGS sequencing protocols and/or familiarity with bulk RNA-Seq analysis is desirable. This workshop assumes some experience working with R/R-Studio. (Previous attendance in a Computational Foundations workshop or Software Carpentry workshop is sufficient.)
• The workshop experience is designed to be interactive and includes a combination of lecture, live-coding, and opportunities for questions throughout.

We are able to refund workshop fees for cancellations prior to 10/16/2024 (when registration closes).

For more questions, please email at bioinformatics-workshops@umich.edu or see the Bioinformatics Core website.