RNA-Seq Blog Transcriptome Research & Industry News
An introductory workshop on applied bioinformatic next-generation sequence analyses run by the National Bioinformatic Infrastructure Sweden (NBIS) in partnership with National Genomics...
Read More »Introduction to Bioinformatics using NGS data
bollito – a flexible pipeline for comprehensive single-cell RNA-Seq analyses
bollito is an automated, flexible and parallelizable computational pipeline for the comprehensive analysis of single-cell RNA-seq data. Starting from...
Read More »miRGalaxy – Galaxy-based framework for interactive analysis of microRNA and isomiR sequencing data
Tools for microRNA (miR) sequencing data analyses are broadly used in biomedical research. However, the complexity of computational approaches still remains a challenge for biologists with scarce experience...
Read More »Spatial Transcriptomics: A Window into Disease
The emerging spatial transcriptomics field is letting researchers map out gene expression in tumor and brain samples. How could this change the way we treat disease...
Read More »Upcoming Webinar – Access and analyze single cell and spatial multiomics data
10x Genomics (www.10xgenomics.com) and BioTuring (www.bioturing.com) will be co-hosting a webinar about single cell and spatial multiomics data analysis this November 25, 2021 at 3:00 PM Singapore Time (GMT+8) | 8:00 AM CET (GMT+1). The webinar covers two talks: Talk ...
Read More »Cutting-edge RNA sequencing molecular tools reveal potential COVID-19 diagnostic and therapeutic targets
Advanced next-generation sequencing of autopsy tissues has furthered molecular understanding of SARS-CoV-2 infection and COVID-19 disease mechanisms, researchers report in The American Journal...
Read More »Large-scale integration of single-cell transcriptomic data as a tool for biological discovery
Single-cell gene expression analyses of myogenesis have been hampered by the poor sampling of rare and transient cell states that are critical for muscle...
Read More »Single-cell RNA sequencing and positional RNA sequencing reveal palmitic acid promotes cancer metastasis and leaves a more aggressive “memory” in tumour cells
Ninety per cent of cancer deaths are caused by metastasis, that is to say, the spread of the primary tumour to other organs. Scientists led by ICREA researcher Dr. Salvador Aznar-Benitah at IRB Barcelona have...
Read More »ulRNA-seq – a library construction scheme for high sensitivity and low abundance gene detection in subcellular or ultralow RNA sequencing
Single-cell RNA sequencing (scRNA-seq) provides new insights to address biological and medical questions, and it will benefit more from the ultralow input...
Read More »scShapes – A statistical framework for identifying distribution shapes in single-cell RNA-sequencing data
scShapes: A statistical framework for identifying distribution shapes in single-cell RNA-sequencing data – Malindrie Dharmaratne – iRNA – Talk – ISMB/ECCB 2021
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