Annotation

Detecting circular RNAs from RNA-Seq data

rna-seq

The pervasive expression of circular RNAs (circRNAs) is a recently discovered feature of gene expression in highly diverged eukaryotes. Numerous algorithms that are used to detect genome-wide circRNA expression from RNA sequencing (RNA-seq) data have been developed in the past ...

Read More »

Mapping eQTLs With RNA-Seq reveals a more comprehensive set of eQTLs and illuminates underlying molecular consequence missed by microarrays

Studies attempting to functionally interpret complex-disease susceptibility loci by GWAS and eQTL integration have predominantly employed microarrays to quantify gene-expression. RNA-Seq has the potential to discover a more comprehensive set of eQTLs and illuminate the underlying molecular consequence. Researchers from ...

Read More »

RNA-Seq analysis of lncRNAs

rna-seq

RNA-Seq is an approach to transcriptome profiling that uses deep-sequencing technologies to detect and accurately quantify RNA molecules originating from a genome at a given moment in time. In recent years, the advent of RNA-Seq has facilitated genome-wide expression profiling, ...

Read More »

The Ensembl gene annotation system

rna-seq

The Ensembl gene annotation system has been used to annotate over 70 different vertebrate species across a wide range of genome projects. Furthermore, it generates the automatic alignment-based annotation for the human and mouse GENCODE gene sets. The system is ...

Read More »

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(http://api.facebook.com/restserver.php?method=links.getStats&format=json&urls=https%3A%2F%2Fwww.rna-seqblog.com%2Fnew-computational-tool-enables-powerful-molecular-analysis-of-biomedical-tissue-samples%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(http://urls.api.twitter.com/1/urls/count.json?url=https%3A%2F%2Fwww.rna-seqblog.com%2Fnew-computational-tool-enables-powerful-molecular-analysis-of-biomedical-tissue-samples%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(http://api.facebook.com/restserver.php?method=links.getStats&format=json&urls=https%3A%2F%2Fwww.rna-seqblog.com%2Fanalyzing-single-cell-landscapes%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(http://urls.api.twitter.com/1/urls/count.json?url=https%3A%2F%2Fwww.rna-seqblog.com%2Fanalyzing-single-cell-landscapes%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(http://api.facebook.com/restserver.php?method=links.getStats&format=json&urls=https%3A%2F%2Fwww.rna-seqblog.com%2Ffire-finder-of-rare-entities-a-fast-and-efficient-method-to-find-rare-cell-types-in-scrna-seq-expression-profiles%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(http://urls.api.twitter.com/1/urls/count.json?url=https%3A%2F%2Fwww.rna-seqblog.com%2Ffire-finder-of-rare-entities-a-fast-and-efficient-method-to-find-rare-cell-types-in-scrna-seq-expression-profiles%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(http://api.facebook.com/restserver.php?method=links.getStats&format=json&urls=https%3A%2F%2Fwww.rna-seqblog.com%2Flaser-seq-measuring-rna-structure-in-cells-with-deep-sequencing%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(http://urls.api.twitter.com/1/urls/count.json?url=https%3A%2F%2Fwww.rna-seqblog.com%2Flaser-seq-measuring-rna-structure-in-cells-with-deep-sequencing%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(http://api.facebook.com/restserver.php?method=links.getStats&format=json&urls=https%3A%2F%2Fwww.rna-seqblog.com%2Fgeras-machine-learning-based-classification-of-cells-into-chronological-stages-using-single-cell-transcriptomics%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(http://urls.api.twitter.com/1/urls/count.json?url=https%3A%2F%2Fwww.rna-seqblog.com%2Fgeras-machine-learning-based-classification-of-cells-into-chronological-stages-using-single-cell-transcriptomics%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(http://api.facebook.com/restserver.php?method=links.getStats&format=json&urls=https%3A%2F%2Fwww.rna-seqblog.com%2Fsingle-cell-rna-seq-of-cells-in-the-early-human-placenta-may-shed-light-on-problem-pregnancies%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(http://urls.api.twitter.com/1/urls/count.json?url=https%3A%2F%2Fwww.rna-seqblog.com%2Fsingle-cell-rna-seq-of-cells-in-the-early-human-placenta-may-shed-light-on-problem-pregnancies%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(http://api.facebook.com/restserver.php?method=links.getStats&format=json&urls=https%3A%2F%2Fwww.rna-seqblog.com%2Fadvanced-rna-sequencing-technology-provides-new-insights-into-human-mitochondrial-diseases%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(http://urls.api.twitter.com/1/urls/count.json?url=https%3A%2F%2Fwww.rna-seqblog.com%2Fadvanced-rna-sequencing-technology-provides-new-insights-into-human-mitochondrial-diseases%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(http://api.facebook.com/restserver.php?method=links.getStats&format=json&urls=https%3A%2F%2Fwww.rna-seqblog.com%2Fpseui-pseudouridine-sites-identification-based-on-rna-sequence-information%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 121

Warning: file_get_contents(): http:// wrapper is disabled in the server configuration by allow_url_fopen=0 in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179

Warning: file_get_contents(http://urls.api.twitter.com/1/urls/count.json?url=https%3A%2F%2Fwww.rna-seqblog.com%2Fpseui-pseudouridine-sites-identification-based-on-rna-sequence-information%2F): failed to open stream: no suitable wrapper could be found in /home/rnaseqbl/public_html/wp-content/plugins/most-shared-posts/msp-fetch.php on line 179