Presentations

Sometimes, analyzing our DNA sequences isn’t quite enough. RNA-seq is a next-generation sequencing (NGS)-based technique that looks at the RNA transcripts produced from our DNA, allowing us to...

Long INterspersed Elements-1 (LINEs/L1s) are repetitive elements that can copy and randomly insert in the genome resulting in genomic instability and mutagenesis. Understanding the expression patterns of L1 loci at the individual level will lend...

Tumor tissue imaging allows for a contextual understanding of tumor cells in relation to the immune microenvironment. The ability to interrogate tissues for multiple proteins that define microscopic regions of interest (ROI) and investigate gene expression...

In this Integrative Genomics Viewer (IGV) tutorial, we walk you through the basics of viewing RNA-Seq data in IGV.

This lecture was recorded at the ITN CONTRA workshop in Warsaw, Poland 2018. CONTRA (Computational ONcology TRaining Alliance) is an European Union funded Innovative Training...

Next-generation sequencing has evolved into a powerful diagnostic tool helping thousands get answers to the most challenging disease diagnoses. Even with today’s newest equipment, many...

Topic: RNA Sequencing Analysis Presented by: Tom Kono, Ph.D. Date: 11/6/18 Minnesota Supercomputing Institute 

Julian Egger PhD Student Department of Medical Informatics & Clinic Epidemiology

The Computational Biology Core (CBC) at Brown University (supported by the COBRE Center for Computational Biology of Human Disease) is teaming up with R/Bioconductor Staff to do two workshops...

The field of epigenetics is branching down many new and exciting avenues. One of these avenues is the area of RNA modification research. Recent advancements in the development of RNA modification detection and sequencing methods...