HTSstation – Get read counts and RPKM of genes and transcripts from a single alignment on the exonome

This is the High-Throughput Sequencing portal of the EPFL Bioinformatics and Biostatistcs core facility. We provide below links to a set of simple pipelines that will read raw sequencing data and provide a set of first-pass analyses using standard techniques that we have designed and tested. The raw files can either be uploaded from a third-party experiment or provided as references to the local Genomics Core Facilities databases. Outputs are linked to GDV for browsing and finer analysis.

RNA-Seq Analysis –

RNA-Seq Tutorial –