Whiteleg shrimp studies examine key organs and pinpoint genes linked to virus response.
Studies have shed light on a disease that has caused billion-dollar losses in a key commercial seafood species.
Insights into the immune system of the Pacific whiteleg shrimp, or king prawn, offer potential routes to mitigate white spot disease, caused by white spot syndrome virus.
The findings, from a pair of studies by Roslin Institute researchers, aid understanding of key organs linked to immunity in the species, of which almost 7m tonnes is produced worldwide each year.

Cell atlas
In one study, scientists examined the shrimp’s hepatopancreas, a combined liver and pancreas organ. They established a method to isolate the nucleus of cells, and were able to investigate the organ’s cells, and associated cells, in detail.
A separate study, the first of its kind, examined the lymphoid organ, which is also closely linked with immunity. The team studied the response to white spot syndrome virus by comparing lymphoid cells from prawns that were exposed to the virus with those from others that were not.
By comparing infected and uninfected cells, the team was able to identify genes linked to infection response.
These results could inform the use of gene-editing to study and potentially mitigate infectious disease in shrimp, including white spot disease, the team suggests.
Valuable findings
Researchers say their work provides useful insight into an understudied, commercially important species, and demonstrates a useful protocol for the study of frozen or archived tissue, or where there is a time delay between tissue sampling and processing.
The studies, published in PLOS One and BMC Genomics, were carried out in collaboration with the University of Exeter and the University of Santiago de Compostela, Spain.
Whiteleg shrimp is among the world’s most popular seafood, and each year significant stocks are lost to white spot syndrome virus, yet relatively little is known about the shrimp’s immune system or the mechanisms of disease.
Studies of key organs can help understand cell behaviour and genes involved in the infection process, which could inform efforts to manage and mitigate infection.
We hope this research provides a foundation for further work into immunity and environmental stress in this commercially important species.
Source – The Roslin Institute
Whiteleg shrimp studies examine key organs and pinpoint genes linked to virus response.
Studies have shed light on a disease that has caused billion-dollar losses in a key commercial seafood species.
Insights into the immune system of the Pacific whiteleg shrimp, or king prawn, offer potential routes to mitigate white spot disease, caused by white spot syndrome virus.
The findings, from a pair of studies by Roslin Institute researchers, aid understanding of key organs linked to immunity in the species, of which almost 7m tonnes is produced worldwide each year.
Cell atlas
In one study, scientists examined the shrimp’s hepatopancreas, a combined liver and pancreas organ. They established a method to isolate the nucleus of cells, and were able to investigate the organ’s cells, and associated cells, in detail.
A separate study, the first of its kind, examined the lymphoid organ, which is also closely linked with immunity. The team studied the response to white spot syndrome virus by comparing lymphoid cells from prawns that were exposed to the virus with those from others that were not.
By comparing infected and uninfected cells, the team was able to identify genes linked to infection response.
These results could inform the use of gene-editing to study and potentially mitigate infectious disease in shrimp, including white spot disease, the team suggests.
Valuable findings
Researchers say their work provides useful insight into an understudied, commercially important species, and demonstrates a useful protocol for the study of frozen or archived tissue, or where there is a time delay between tissue sampling and processing.
The studies, published in PLOS One and BMC Genomics, were carried out in collaboration with the University of Exeter and the University of Santiago de Compostela, Spain.
Whiteleg shrimp is among the world’s most popular seafood, and each year significant stocks are lost to white spot syndrome virus, yet relatively little is known about the shrimp’s immune system or the mechanisms of disease.
Studies of key organs can help understand cell behaviour and genes involved in the infection process, which could inform efforts to manage and mitigate infection.
We hope this research provides a foundation for further work into immunity and environmental stress in this commercially important species.
Source – The Roslin Institute
Florea A, Wade N, Salisbury SJ, Furniss J, Fraslin C, Chapuis A, Sullivan K, Stewart R, Robledo D, Bean TP. (2026) Transcriptomic study of WSSV infection in Litopenaeus vannamei lymphoid organ via single nuclei RNA sequencing. PLOS ONE 21(4): e0348006. [article]
Florea A, Daniels RR, Salisbury SJ, Furniss J, Robledo D, Bean TP. (2025) Generation of a Litopenaeus vannamei hepatopancreas cell atlas from single nuclei transcriptomics using a new nuclei isolation method. BMC Genomics 27(1): 112. [article]
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Whiteleg shrimp studies examine key organs and pinpoint genes linked to virus response.
Studies have shed light on a disease that has caused billion-dollar losses in a key commercial seafood species.
Insights into the immune system of the Pacific whiteleg shrimp, or king prawn, offer potential routes to mitigate white spot disease, caused by white spot syndrome virus.
The findings, from a pair of studies by Roslin Institute researchers, aid understanding of key organs linked to immunity in the species, of which almost 7m tonnes is produced worldwide each year.
Cell atlas
In one study, scientists examined the shrimp’s hepatopancreas, a combined liver and pancreas organ. They established a method to isolate the nucleus of cells, and were able to investigate the organ’s cells, and associated cells, in detail.
A separate study, the first of its kind, examined the lymphoid organ, which is also closely linked with immunity. The team studied the response to white spot syndrome virus by comparing lymphoid cells from prawns that were exposed to the virus with those from others that were not.
By comparing infected and uninfected cells, the team was able to identify genes linked to infection response.
These results could inform the use of gene-editing to study and potentially mitigate infectious disease in shrimp, including white spot disease, the team suggests.
Valuable findings
Researchers say their work provides useful insight into an understudied, commercially important species, and demonstrates a useful protocol for the study of frozen or archived tissue, or where there is a time delay between tissue sampling and processing.
The studies, published in PLOS One and BMC Genomics, were carried out in collaboration with the University of Exeter and the University of Santiago de Compostela, Spain.
Whiteleg shrimp is among the world’s most popular seafood, and each year significant stocks are lost to white spot syndrome virus, yet relatively little is known about the shrimp’s immune system or the mechanisms of disease.
Studies of key organs can help understand cell behaviour and genes involved in the infection process, which could inform efforts to manage and mitigate infection.
We hope this research provides a foundation for further work into immunity and environmental stress in this commercially important species.
Source – The Roslin Institute
Florea A, Wade N, Salisbury SJ, Furniss J, Fraslin C, Chapuis A, Sullivan K, Stewart R, Robledo D, Bean TP. (2026) Transcriptomic study of WSSV infection in Litopenaeus vannamei lymphoid organ via single nuclei RNA sequencing. PLOS ONE 21(4): e0348006. [article]
Florea A, Daniels RR, Salisbury SJ, Furniss J, Robledo D, Bean TP. (2025) Generation of a Litopenaeus vannamei hepatopancreas cell atlas from single nuclei transcriptomics using a new nuclei isolation method. BMC Genomics 27(1): 112. [article]
Related Posts
Benchmarking RNA sequencing for more accurate alternative splicing analysis
RNA Sequencing identifies new tick-borne virus that causes flu-like illness
Small RNA sequencing reveals regulatory roles for sdRNAs in acute myeloid leukemia
POND-seq enables non-destructive RNA sequencing in living cells
Worm’s radical transformation shows metamorphosis can change the functions of cells
New method allows scientists to follow gene activity over time in the same cells
Single-cell and single-embryo RNA sequencing
RNA sequencing reveals functional chimeric mRNAs in mammalian immunity
Deep learning improves microRNA target prediction from sequence
Atlas of the brain’s striatum could guide researchers to new drug treatments
scLS – a computationally efficient differentially expressed gene detection algorithm
Spatial mapping of RNA turnover kinetics in the mouse brain
SPIDER improves spatial transcriptomics data using single-cell RNA sequencing
Ultrafast and reference-free sequence discovery in single-cell data
ARCADIA combines RNA sequencing and spatial proteomics to reveal how tissue location shapes cell behavior
An end-to-end computational framework for “Record-seq” transcriptional recording data
A functionally integrated cross-tissue alternative splicing program during short-term calorie restriction
ExoShorkie – predicting RNA-seq coverage of exogenous genomes in yeast by transfer learning
Dietary oxidized plant sterol shifts macrophage state to fuel aortic inflammation
Bonsai reconstructs tree representations for distortion-free visualization and exploration of high-dimensional data
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