RNA-Seq Blog Transcriptome Research & Industry News
An overview of the SAMCNet package (available at https://github.com/binarybana/samcnet) that implements optimal Bayesian classification for RNA-Seq data as part of an upcoming publication. (Publication details will follow once reviewed and accepted)
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- Improved nanopore read accuracy enables single-cell RNA sequencing
- Single-cell RNA sequencing reveals the genetic code of growing limbs
- A robust methodology for assessing differential homeolog contributions to the transcriptomes of allopolyploids
- RNA-Seq identifies skin origins, could lead to better grafts
- GraphDDP – a graph-embedding approach to detect differentiation pathways in single-cell-data using prior class knowledge
- Single-cell RNA-Seq gives scientists unprecedented view of brain development
- BGP – identifying gene-specific branching dynamics from single-cell data with a branching Gaussian process
- iSEE – an interactive Shiny-based graphical user interface for exploring data stored in SummarizedExperiment objects
- Vex-seq – high-throughput identification of the impact of genetic variation on pre-mRNA splicing efficiency
- Medicare covers Veracyte’s RNA-Seq based Envisia Test
