RNA-Seq Blog Transcriptome Research & Industry News
Citrus is one of the most important and widely grown fruit crop with global production ranking firstly among all the fruit crops in the world. Sweet orange accounts for more ...
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RNA-SEQ NEWS
RNA sequencing read depth requirement for optimal transcriptome coverage
One of the concerns of assembling de novo transcriptomes is determining the amount of read sequences required to ensure a comprehensive coverage of genes expressed in a particular sample. In ...
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SHEAR: sample heterogeneity estimation and assembly by reference
Personal genome assembly is a critical process when studying tumor genomes and other highly divergent sequences. The accuracy of downstream analyses, such as RNA-seq and ChIP-seq, can be greatly enhanced ...
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NGSANE: A Lightweight Production Informatics Framework for High Throughput Data Analysis
The initial steps in the analysis of Next Generation Sequencing (NGS) data can be automated by way of software ‘pipelines’. However, individual components depreciate rapidly due to evolving technology and ...
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HTSstation: A Web Application and Open-Access Libraries for High-Throughput Sequencing Data Analysis
The HTSstation analysis portal is a suite of simple web forms coupled to modular analysis pipelines for various applications of High-Throughput Sequencing including ChIP-seq, RNA-seq, 4C-seq and re-sequencing. HTSstation offers ...
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RNA-seq QC in GenePattern
This tutorial covers common quality control metrics that can be used for evaluating aligned RNA-seq data files in GenePattern
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A comparison of RNA-seq and exon arrays for whole genome transcription profiling
The past decade has seen an abundance of transcriptional profiling studies of preclinical models of persistent pain, predominantly employing microarray technology. In this study a team led by scientists from ...
Read More »Jobs
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Featured RNA-Seq Job – Research Associate/Senior Research Associate (Single Cell RNA Sequencing Library Preparation)
Neurona Therapeutics is an early-stage biotechnology company based in South San Francisco focused on the development of neuronal cell-based therapies for neurological diseases...
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Featured RNA-Seq Job – Computational Scientist
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Bioinformatics research positions available
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Postdoctoral Position in Bioinformatics to study Gene Regulatory Networks
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Postdoc position available – computational biology: tumour heterogeneity and resistance mechanisms
Industry News
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Single Cell Discoveries and BioTuring announce collaboration to improve single-cell sequencing research
Single Cell Discoveries and BioTuring announce a collaboration to improve single-cell sequencing research. As part of the collaboration, Single Cell Discoveries will add BioTuring’s single-cell data analysis...
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Dolomite Bio launches bioinformatics service for single-cell research
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Veranome Biosystems and Cold Spring Harbor Laboratory Enter Collaboration and Licensing Agreement to Develop Advanced In-Situ Sequencing Technologies
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Lucence’s LiquidHALLMARK Sequencing-based Liquid Biopsy Assay Expands to Include cfRNA
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Azenta Life Sciences Expands Fleet of PacBio HiFi Sequencing Systems
