RNA-Seq Data Preprocessing Tutorial

Check the full description for links to all the resources and the protocol etc.

This tutorial follows the Delhomme et al. Epigenesys protocol for RNA sequencing data preprocessing in order to finally perform a differential expression study. To demonstrate, we will be using the bschiffthaler/ngs docker implementation.

The pipeline that is sometimes referred to in the video: http://www.epigenesys.eu/images/stori…
The docker image that was used: https://registry.hub.docker.com/u/bsc…
Our homepage: https://bioinformatics.upsc.se
The institute’s home page: http://www.upsc.se/

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