Joint injury can lead to post-traumatic osteoarthritis (PTOA). In fact, about half of all people who rupture the anterior cruciate ligament (ACL) in their knee will develop PTOA within 10 to 20 years of the injury.
But the molecular and cellular mechanisms leading to cartilage degeneration or PTOA due to trauma are not well understood.
Sometimes called degenerative joint disease or “wear and tear” arthritis, osteoarthritis (OA) is the most common chronic condition of the joints. It occurs when the cartilage or cushion between joints breaks down leading to pain, stiffness and swelling.
Many individuals developing OA show no signs until significant joint damage has occurred. At that point, the only available long term treatment options are surgical replacement of the joint and/or pain management.
Identifying and characterizing OA biomarkers for detecting and tracking the progression of the disease, combined with developing new pharmacologic interventions aimed to minimize cartilage damage, could personalize medical treatment before the disease is all consuming. Most importantly, treatments could be developed that, when administered immediately post injury, would prevent the development of PTOA years later.
“The goal of the study was to see if there are biomarkers associated with cartilage degradation, which could then be further explored as therapeutic targets in future experiments,” said Jiun Chang, a UC Merced graduate student mentored by LLNL’s Gaby Loots and the lead author of the study.
The study identified 1,446 genes differentially expressed in injured joints, including several known regulators of OA, as well as many new genes. The team also identified 18 long, noncoding RNAs differentially expressed in the injured joints, RNAs that have not yet been explored functionally in this context.
“This study provides the first account of gene expression changes associated with PTOA development and progression in this tibial compression model,” said Aimy Sebastian, also a UC Merced graduate student mentored by Loots, who co-lead the study with Chang.
Jiun Chang and Aimy Sebastian, UC Merced graduate students working at LLNL, examine the whole-joint gene expression of arthritis by RNA sequencing at one day and one, six and 12 weeks after injury.
The research team also included LLNL staff member Deepa Murugesh; UC Davis professor Blaine Christiansen; and Sarah Hatsell and Aris Economides of Regeneron.
“By comparing our data to gene-expression data generated using the surgical destabilization of the medial meniscus PTOA model, we identified several common genes and shared mechanisms. Our study highlights several differences between these two models and suggests that the tibial compression model may be a more rapidly progressing model of PTOA,” said Loots, an LLNL biologist who leads the team.
This study provides the first account of whole genome expression profiles to obtain new insights into the temporal progression of the disease.
[box type=”shadow” align=”alignleft” ]Chang JC, Sebastian A, Murugesh DK, Hatsell S, Economides AN, Christiansen BA, Loots GG. (2016) Global molecular changes in a tibial compression induced ACL rupture model of post-traumatic osteoarthritis. J Orthop Res [Epub ahead of print]. [article][/fusion_text][/fusion_builder_column_inner][/fusion_builder_row_inner][/fusion_builder_column]
Joint injury can lead to post-traumatic osteoarthritis (PTOA). In fact, about half of all people who rupture the anterior cruciate ligament (ACL) in their knee will develop PTOA within 10 to 20 years of the injury.
But the molecular and cellular mechanisms leading to cartilage degeneration or PTOA due to trauma are not well understood.
Sometimes called degenerative joint disease or “wear and tear” arthritis, osteoarthritis (OA) is the most common chronic condition of the joints. It occurs when the cartilage or cushion between joints breaks down leading to pain, stiffness and swelling.
Many individuals developing OA show no signs until significant joint damage has occurred. At that point, the only available long term treatment options are surgical replacement of the joint and/or pain management.
Identifying and characterizing OA biomarkers for detecting and tracking the progression of the disease, combined with developing new pharmacologic interventions aimed to minimize cartilage damage, could personalize medical treatment before the disease is all consuming. Most importantly, treatments could be developed that, when administered immediately post injury, would prevent the development of PTOA years later.
“The goal of the study was to see if there are biomarkers associated with cartilage degradation, which could then be further explored as therapeutic targets in future experiments,” said Jiun Chang, a UC Merced graduate student mentored by LLNL’s Gaby Loots and the lead author of the study.
The study identified 1,446 genes differentially expressed in injured joints, including several known regulators of OA, as well as many new genes. The team also identified 18 long, noncoding RNAs differentially expressed in the injured joints, RNAs that have not yet been explored functionally in this context.
“This study provides the first account of gene expression changes associated with PTOA development and progression in this tibial compression model,” said Aimy Sebastian, also a UC Merced graduate student mentored by Loots, who co-lead the study with Chang.
Jiun Chang and Aimy Sebastian, UC Merced graduate students working at LLNL, examine the whole-joint gene expression of arthritis by RNA sequencing at one day and one, six and 12 weeks after injury.
The research team also included LLNL staff member Deepa Murugesh; UC Davis professor Blaine Christiansen; and Sarah Hatsell and Aris Economides of Regeneron.
“By comparing our data to gene-expression data generated using the surgical destabilization of the medial meniscus PTOA model, we identified several common genes and shared mechanisms. Our study highlights several differences between these two models and suggests that the tibial compression model may be a more rapidly progressing model of PTOA,” said Loots, an LLNL biologist who leads the team.
This study provides the first account of whole genome expression profiles to obtain new insights into the temporal progression of the disease.
[box type=”shadow” align=”alignleft” ]Chang JC, Sebastian A, Murugesh DK, Hatsell S, Economides AN, Christiansen BA, Loots GG. (2016) Global molecular changes in a tibial compression induced ACL rupture model of post-traumatic osteoarthritis. J Orthop Res [Epub ahead of print]. [article][/fusion_text][/fusion_builder_column_inner][/fusion_builder_row_inner][/fusion_builder_column]
Joint injury can lead to post-traumatic osteoarthritis (PTOA). In fact, about half of all people who rupture the anterior cruciate ligament (ACL) in their knee will develop PTOA within 10 to 20 years of the injury.
But the molecular and cellular mechanisms leading to cartilage degeneration or PTOA due to trauma are not well understood.
Recently, a team of scientists from Lawrence Livermore National Laboratory (LLNL), University of California, Davis, University of California, Merced and Regeneron Pharmaceuticals examined the whole-joint gene expression by RNA sequencing at one day and one, six and 12 weeks after injury. The team used a new, non-invasive tibial compression mouse model of PTOA that mimics ACL rupture in humans from a single high-impact injury.
The research appears in the online edition of the Journal of Orthopaedic Research.
Sometimes called degenerative joint disease or “wear and tear” arthritis, osteoarthritis (OA) is the most common chronic condition of the joints. It occurs when the cartilage or cushion between joints breaks down leading to pain, stiffness and swelling.
Many individuals developing OA show no signs until significant joint damage has occurred. At that point, the only available long term treatment options are surgical replacement of the joint and/or pain management.
Identifying and characterizing OA biomarkers for detecting and tracking the progression of the disease, combined with developing new pharmacologic interventions aimed to minimize cartilage damage, could personalize medical treatment before the disease is all consuming. Most importantly, treatments could be developed that, when administered immediately post injury, would prevent the development of PTOA years later.
The study identified 1,446 genes differentially expressed in injured joints, including several known regulators of OA, as well as many new genes. The team also identified 18 long, noncoding RNAs differentially expressed in the injured joints, RNAs that have not yet been explored functionally in this context.
Jiun Chang and Aimy Sebastian, UC Merced graduate students working at LLNL, examine the whole-joint gene expression of arthritis by RNA sequencing at one day and one, six and 12 weeks after injury.
The research team also included LLNL staff member Deepa Murugesh; UC Davis professor Blaine Christiansen; and Sarah Hatsell and Aris Economides of Regeneron.
This study provides the first account of whole genome expression profiles to obtain new insights into the temporal progression of the disease.
The research was funded in part by the Department of Defense, Peer Reviewed Orthopaedic Research Program.
Source: DOE/Lawrence Livermore National Laboratory
[box type=”shadow” align=”alignleft” ]Chang JC, Sebastian A, Murugesh DK, Hatsell S, Economides AN, Christiansen BA, Loots GG. (2016) Global molecular changes in a tibial compression induced ACL rupture model of post-traumatic osteoarthritis. J Orthop Res [Epub ahead of print]. [article][/fusion_text][/fusion_builder_column_inner][/fusion_builder_row_inner][/fusion_builder_column]Related Posts
Avoiding a sticky situation: how cells stop messenger RNAs from clumping together
Single Cell Discoveries Acquires TATAA Biocenter to Create an End-to-End Precision Biology CRO
RNA Sequencing identifies new tick-borne virus that causes flu-like illness
Eclipsebio expands its RNA characterization capabilities with multi-attribute nanopore-based sequencing assay eSTRAND RNA QC™
Creative Biolabs expands advanced single-cell multi-omics and RNA sequencing solutions to support biomedical discovery
Worm’s radical transformation shows metamorphosis can change the functions of cells
HeartBeat.bio and Cubase Bio Partner to Advance 3D Spatial Transcriptomics for Cardiovascular Drug Discovery
RNA sequencing reveals functional chimeric mRNAs in mammalian immunity
New Johns Hopkins Study Identifies Pervasive RT-qPCR Artifact in CRISPR Knockdown Studies and How UltraMarathonRT® Solves It
Atlas of the brain’s striatum could guide researchers to new drug treatments
Lexogen Expands NGS Services with GCLP-Compliant Workflows
Immune cells offer insights on billion-dollar virus
A functionally integrated cross-tissue alternative splicing program during short-term calorie restriction
Dietary oxidized plant sterol shifts macrophage state to fuel aortic inflammation
Unlocking the past – new method helps gain insights into old tissue
Novel AI model trained on RNA-Seq data accurately detects key gene mutations and predicts biomarkers across 32 cancer types
Transcriptomic aging clock reveals age-related molecular patterns in opioid dependence
RNA sequencing helps predict stem cell transplant benefit in pediatric AML
Protein ‘switch’ determines whether liposarcoma cells will become aggressive
Precursor tRNAs sense temperature changes: heat stress-induced capped pre-tRNAs suppress protein synthesis
Joint injury can lead to post-traumatic osteoarthritis (PTOA). In fact, about half of all people who rupture the anterior cruciate ligament (ACL) in their knee will develop PTOA within 10 to 20 years of the injury.
But the molecular and cellular mechanisms leading to cartilage degeneration or PTOA due to trauma are not well understood.
Recently, a team of scientists from Lawrence Livermore National Laboratory (LLNL), University of California, Davis, University of California, Merced and Regeneron Pharmaceuticals examined the whole-joint gene expression by RNA sequencing at one day and one, six and 12 weeks after injury. The team used a new, non-invasive tibial compression mouse model of PTOA that mimics ACL rupture in humans from a single high-impact injury.
The research appears in the online edition of the Journal of Orthopaedic Research.
Sometimes called degenerative joint disease or “wear and tear” arthritis, osteoarthritis (OA) is the most common chronic condition of the joints. It occurs when the cartilage or cushion between joints breaks down leading to pain, stiffness and swelling.
Many individuals developing OA show no signs until significant joint damage has occurred. At that point, the only available long term treatment options are surgical replacement of the joint and/or pain management.
Identifying and characterizing OA biomarkers for detecting and tracking the progression of the disease, combined with developing new pharmacologic interventions aimed to minimize cartilage damage, could personalize medical treatment before the disease is all consuming. Most importantly, treatments could be developed that, when administered immediately post injury, would prevent the development of PTOA years later.
The study identified 1,446 genes differentially expressed in injured joints, including several known regulators of OA, as well as many new genes. The team also identified 18 long, noncoding RNAs differentially expressed in the injured joints, RNAs that have not yet been explored functionally in this context.
Jiun Chang and Aimy Sebastian, UC Merced graduate students working at LLNL, examine the whole-joint gene expression of arthritis by RNA sequencing at one day and one, six and 12 weeks after injury.
The research team also included LLNL staff member Deepa Murugesh; UC Davis professor Blaine Christiansen; and Sarah Hatsell and Aris Economides of Regeneron.
This study provides the first account of whole genome expression profiles to obtain new insights into the temporal progression of the disease.
The research was funded in part by the Department of Defense, Peer Reviewed Orthopaedic Research Program.
Source: DOE/Lawrence Livermore National Laboratory
[box type=”shadow” align=”alignleft” ]Chang JC, Sebastian A, Murugesh DK, Hatsell S, Economides AN, Christiansen BA, Loots GG. (2016) Global molecular changes in a tibial compression induced ACL rupture model of post-traumatic osteoarthritis. J Orthop Res [Epub ahead of print]. [article][/fusion_text][/fusion_builder_column_inner][/fusion_builder_row_inner][/fusion_builder_column]Related Posts
Avoiding a sticky situation: how cells stop messenger RNAs from clumping together
Single Cell Discoveries Acquires TATAA Biocenter to Create an End-to-End Precision Biology CRO
RNA Sequencing identifies new tick-borne virus that causes flu-like illness
Eclipsebio expands its RNA characterization capabilities with multi-attribute nanopore-based sequencing assay eSTRAND RNA QC™
Creative Biolabs expands advanced single-cell multi-omics and RNA sequencing solutions to support biomedical discovery
Worm’s radical transformation shows metamorphosis can change the functions of cells
HeartBeat.bio and Cubase Bio Partner to Advance 3D Spatial Transcriptomics for Cardiovascular Drug Discovery
RNA sequencing reveals functional chimeric mRNAs in mammalian immunity
New Johns Hopkins Study Identifies Pervasive RT-qPCR Artifact in CRISPR Knockdown Studies and How UltraMarathonRT® Solves It
Atlas of the brain’s striatum could guide researchers to new drug treatments
Lexogen Expands NGS Services with GCLP-Compliant Workflows
Immune cells offer insights on billion-dollar virus
A functionally integrated cross-tissue alternative splicing program during short-term calorie restriction
Dietary oxidized plant sterol shifts macrophage state to fuel aortic inflammation
Unlocking the past – new method helps gain insights into old tissue
Novel AI model trained on RNA-Seq data accurately detects key gene mutations and predicts biomarkers across 32 cancer types
Transcriptomic aging clock reveals age-related molecular patterns in opioid dependence
RNA sequencing helps predict stem cell transplant benefit in pediatric AML
Protein ‘switch’ determines whether liposarcoma cells will become aggressive
Precursor tRNAs sense temperature changes: heat stress-induced capped pre-tRNAs suppress protein synthesis
Stay Connected
Submit a Post to the Blog
Recent Posts
Subscribe to the RNA-Seq Blog
RNA-Seq Products & Services