TRAP-SEQ – Translating Ribosome Affinity Purification (TRAP) Followed by RNA Sequencing Technology

March 17, 2015 Leave a comment 13,739 Views

Translating Ribosome Affinity Purification (TRAP) is a technology to isolate the population of mRNAs associated with at least one 80S ribosome, referred as the translatome. TRAP is based on the expression of an epitope-tagged version of a ribosomal protein and ...

Emerging computational approaches that integrate RNA-seq data for predicting the functions of alternatively spliced isoforms

June 30, 2014 Leave a comment 7,699 Views

The vast majority of multi-exon genes in humans undergo alternative splicing, which greatly increases the functional diversity of protein species. Predicting functions at the isoform level is essential to further our understanding of developmental abnormalities and cancers, which frequently exhibit ...

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Tag Archives: alternatively spliced isoforms

TRAP-SEQ – Translating Ribosome Affinity Purification (TRAP) Followed by RNA Sequencing Technology

Emerging computational approaches that integrate RNA-seq data for predicting the functions of alternatively spliced isoforms

Learning to predict RNA sequence expressions from whole slide images

CRIC-seq – global profiling of in-situ RNA–RNA contacts associated with a specific RNA-binding protein

Novel machine-learning algorithm creates atlas of cancer with potential as universal diagnostic platform

Long noncoding RNA profiling may be effective for stratification in pediatric AML

spSeudoMap – cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data

SoCube – an innovative end-to-end doublet detection algorithm for analyzing scRNA-seq data

Quantabio adds powerful bead booster chemistry to ultra-fast sparQ RNA-Seq HMR kit