An open RNA-Seq data analysis pipeline/tutorial with an example of reprocessing data from a recent Zika virus study

August 19, 2016 Leave a comment 11,789 Views

RNA-seq analysis is becoming a standard method for global gene expression profiling. However, open and standard pipelines to perform RNA-seq analysis by non-experts remain challenging due to the large size of the raw data files and the hardware requirements for ...

TGen, Barrow, Phoenix Children’s Land $4M for Brain Injury RNA Sequencing Study

January 3, 2014 Leave a comment 3,447 Views

from GenomeWeb NEW YORK (GenomeWeb News) – Translational Genomics Research Institute, the Barrow Neurological Institute at St. Joseph’s Hospital and Medical Center, and Phoenix Children’s Hospital have received a $4 million grant to search for biomarkers to identify which brain ...

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Tag Archives: Barrow Neurological Institute

An open RNA-Seq data analysis pipeline/tutorial with an example of reprocessing data from a recent Zika virus study

TGen, Barrow, Phoenix Children’s Land $4M for Brain Injury RNA Sequencing Study

New pan-cancer single-cell T cell atlas reveals new details of tumor microenvironment

scSemiAAE – a semi-supervised clustering model for single-cell RNA-seq data

Avidity Sequencing – high accuracy with low reagent consumption

scMEB – a fast and clustering-independent method for detecting differentially expressed genes in single-cell RNA-seq data

Researchers weave deeper understanding of diverse ancestry and gene expression

ExpressAnalyst – a unified platform for RNA-sequencing analysis in non-model species

Celloscope – a probabilistic model for marker-gene-driven cell type deconvolution in spatial transcriptomics data