BBMap (aligner for DNA/RNA-Seq) is now open-source and available for download

February 24, 2014 Leave a comment 10,876 Views

BBMap is now available here: https://sourceforge.net/projects/bbmap/ BBMap/BBtools are now open source. Please try it out – it’s a 3MB download, and written in pure Java, so installation is trivial – just unzip and run. Handles all platforms (Illumina, PacBio, 454, ...

RNA-Seq Blog Transcriptome Research & Industry News

Tag Archives: BBMap

BBMap (aligner for DNA/RNA-Seq) is now open-source and available for download

Learning to predict RNA sequence expressions from whole slide images

CRIC-seq – global profiling of in-situ RNA–RNA contacts associated with a specific RNA-binding protein

Novel machine-learning algorithm creates atlas of cancer with potential as universal diagnostic platform

Long noncoding RNA profiling may be effective for stratification in pediatric AML

spSeudoMap – cell type mapping of spatial transcriptomics using unmatched single-cell RNA-seq data

SoCube – an innovative end-to-end doublet detection algorithm for analyzing scRNA-seq data

Quantabio adds powerful bead booster chemistry to ultra-fast sparQ RNA-Seq HMR kit