Learn how to automate your NGS data analyses and create reproducible/scalable pipelines In a nutshell Learn the fundamental best-practices of bioinformatic pipeline development Understand how workflow management systems can accelerate your research Use state-of-the-art, open source software to make complex ...
Read More »CirComPara – A Multi-Method Comparative Bioinformatics Pipeline to Detect and Study circRNAs from RNA-seq Data
Circular RNAs (circRNAs) are generated by backsplicing of immature RNA forming covalently closed loops of intron/exon RNA molecules. Pervasiveness, evolutionary conservation, massive and regulated expression, and posttranscriptional regulatory roles of circRNAs in eukaryotes have been...
Read More »A pipeline for rapid gene discovery and expression analysis of a plant host and its obligate parasite
Current and emerging plant diseases caused by obligate parasitic microbes such as rusts, downy mildews, and powdery mildews threaten worldwide crop production and food safety. These obligate parasites are typically unculturable in the laboratory, posing technical challenges to characterize them ...
Read More »Sinova – Systematic Reconstruction of Molecular Cascades Using Single-Cell RNA-Seq
The growth plate (GP) comprising sequentially differentiated cell layers is a critical structure for bone elongation and regeneration. Although several key regulators in GP development have been identified using genetic perturbation, systematic understanding is still limited. Here, researchers from Tsinghua ...
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