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Tag Archives: Boolean

BoolFilter – an R package for estimation and identification of partially-observed Boolean dynamical systems

November 28, 2017 Leave a comment 2,694 Views

rna-seq

Gene regulatory networks govern the function of key cellular processes, such as control of the cell cycle, response to stress, DNA repair mechanisms, and more. Boolean networks have been used successfully in modeling gene regulatory networks. In the Boolean network ...

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Recent RNA-SEQ Pubs

Neurodevelopmental and transcriptomic effects of CRISPR/Cas9-induced somatic <em>orco</em> mutation in honey bees
5 March 2021
RNA helicase DDX5 acts as a critical regulator for survival of neonatal mouse gonocytes
5 March 2021
Transcriptomic data showing differentially expressed genes between Notch3 and Notch4 deleted mice
5 March 2021
Comparative transcriptome analysis of roots, stems, and leaves of <em>Pueraria lobata</em> (Willd.) Ohwi: identification of genes involved in isoflavonoid biosynthesis
5 March 2021
The long non-coding RNA MEG3 plays critical roles in the pathogenesis of cholesterol gallstone
5 March 2021
Evaluation of key miRNAs during early pregnancy in Kazakh horse using RNA sequencing
5 March 2021

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What is RNA-Seq?

long RNAs are first converted into a library of cDNA fragments through either RNA fragmentation or DNA fragmentation. Sequencing adaptors (blue) are subsequently added to each cDNA fragment and a short sequence is obtained from each cDNA using high-throughput sequencing technology. The resulting sequence reads are aligned with the reference genome or transcriptome, and classified as three types: exonic reads, junction reads and poly(A) end-reads. These three types are used to generate a base-resolution expression profile for each gene. Nat Rev Genet 10(1):57-63 (2009)


RNA-Seq

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    Learn more about available bioinformatics tools and pipelines to analyze RNA sequencing data

    17 hours ago
  • rna-seq

    New search engine for single cell atlases

    18 hours ago
  • rna-seq

    Yale researchers identify tumor reactive immune cells with RNA sequencing to help fight against advanced melanoma

    19 hours ago
  • rna-seq

    New algorithm identifies ‘escaping’ cells in single-cell CRISPR screens

    2 days ago
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    RNA sequencing brings hope for endangered wild cats

    2 days ago
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    Mim-tRNAseq – A method that accurately measures the abundance and modification status of different tRNAs

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    Uncovering the Anti-Myeloma Resistance Files

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