Researchers from Georgia State University present IsoEM2 and IsoDE2, new versions with enhanced features and faster runtime of the IsoEM and IsoDE packages for expression level estimation and differential expression. IsoEM2 estimates FPKM and TPM levels for genes and isoforms ...
Read More »Differential analysis of RNA-seq incorporating quantification uncertainty
Caltech researchers describe sleuth, a method for the differential analysis of gene expression data that utilizes bootstrapping in conjunction with response error linear modeling to decouple biological variance from inferential variance. sleuth is implemented in an interactive shiny app that ...
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