SAN DIEGO – PRNewswire – Edico Genome, creator of the world’s first bio-IT processor designed to analyze next-generation sequencing data, today announced a collaboration with IBM to make DRAGEN available on the new IBM Power Systems S822LC for high performance ...
Read More »Featured RNA-Seq Job – Computational Biologist, Stanley Center at Broad Institute
Job Title – Computational Biologist, Stanley Center Location – Broad Institute, Cambridge MA Job Description The Broad Institute’s Stanley Center for Psychiatric Research is working to identify the cellular and molecular pathways disrupted in brain disorders such as schizophrenia and ...
Read More »Div-Seq – A single nucleus RNA-Seq method reveals dynamics of rare adult newborn neurons in the CNS
Transcriptomes of individual neurons provide rich information about cell types and dynamic states. However, it is difficult to capture rare dynamic processes, such as adult neurogenesis, because isolation from dense adult tissue is challenging, and markers for each phase are ...
Read More »GTEx Project Community Scientific Meeting
July 11, 2016 The 2016 GTEx Project Community Meeting will be held at Stanford University. The meeting will highlight current data sets and types available, various tools being developed for these data types, and results from applying them to the ...
Read More »Featured RNA-Seq Job – Computational Genomics and Bioinformatics Director
Primary Location: MA-Boston-185 Cambridge – MGH Work Locations: 185 Cambridge – MGH 185 Cambridge Street Boston 02144 Job: IT/Health IT/Informatics – Management Organization: Massachusetts General Hospital(MGH) Schedule: Full-time Standard Hours: 40 Shift: Day Job Posted Shift Description: Computational Genomics and ...
Read More »2015 GTEx Project Community Scientific Meeting
Welcome to the third annual GTEx Project Community Meeting! The meeting this year will be held in Chicago at the University of Chicago. The meeting will highlight current data sets and types available, what tools are available, and analysis methods ...
Read More »Leveraging a Cray Supercomputer for Parallel De novo Transcriptome assembly using Trinity
The Trinity RNA-Seq de novo assembly software has become a popular application for reconstructing transcriptomes from RNA-Seq in the realms of diverse model and non-model organisms. Trinity involves several software modules (Inchworm, Chrysalis, and Butterfly) that operate in sequence, with ...
Read More »Single-cell RNA-seq reveals dynamic paracrine control of cellular variation
Broad Paper Vids: Single-cell RNA-seq reveals dynamic paracrine control of cellular variation About Broad Paper Vids – Broad Paper Vid is a collection of video abstracts covering Broad scientists’ published papers. In each video, Broad researchers describe the exciting scientific ...
Read More »The GATK Best Practices for variant calling on RNAseq
by Geraldine_VdAuwera at GATK Best Practices workflow for RNAseq This workflow is intended to be run per-sample; joint calling on RNAseq is not supported yet, though that is on our roadmap. Please see the new document here for full details ...
Read More »Upcoming Webinar – De novo transcriptome assembly with RNA-Seq data
Date: Thursday, April 17th Time: 11AM PST · 2PM EST Duration: 45 minutes Title: De novo transcriptome assembly with RNA-seq data: Using the Trinity pipeline to delineate the status of Millepora species in the Caribbean Sea The Trinity pipeline, developed ...
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