Designing alternative splicing RNA-seq studies

August 5, 2015 Leave a comment 5,965 Views

D esigning an RNA-seq study depends critically on its specific goals, technology and underlying biology, which renders general guidelines inadequate. A team led by researchers at IRB Barcelona have developed a Bayesian framework to customize experiments so that goals can ...

RNA-Seq Blog Transcriptome Research & Industry News

Tag Archives: casperDesign

Designing alternative splicing RNA-seq studies

RNA folding studies by tRNA structure-seq inside peptide-rich droplets reveal roles of modified nucleosides at the origin of life

GiRAFR – gRNA detection and annotation in single-cell CRISPR screens

RNA sequencing reaveals novel intracellular signaling mechanisms that promote melanoma growth

AAV-Perturb-seq – adeno-associated virus (AAV)-mediated direct in vivo single-cell CRISPR screening

capTEs – Cas9-assisted profiling transposable elements expression sequencing

eSPET-seq – genome-wide probing of eukaryotic nascent RNA structure

DISCERN – deep single-cell expression reconstruction for improved cell clustering and cell subtype and state detection