Don't Miss
  • New algorithm identifies ‘escaping’ cells in single-cell CRISPR screens
  • RNA sequencing brings hope for endangered wild cats
  • Mim-tRNAseq – A method that accurately measures the abundance and modification status of different tRNAs
  • Uncovering the Anti-Myeloma Resistance Files
  • Long term and short-term effects of RNA fixation on Single Cell RNA Sequencing
  • Single cell RNA sequencing opens new avenues for eradicating leukaemia at its source
  • 2passtools: two-pass alignment using machine-learning-filtered splice junctions increases the accuracy of intron detection in long-read RNA sequencing
  • scRNA-Seq reveals a new type of bone cell that may uncover therapeutic targets for a range of skeletal diseases
  • DEBKS – a tool to detect differentially expressed circular RNA
  • Single-cell RNA and protein expression in relation to cell cycle progression

RNA-Seq BlogRNA-Seq Blog Transcriptome Research & Industry News

  • Home
  • News
    • Commentary
    • Headlines
    • Industry News
    • Grants / Funding
    • Information
    • Poll Results
    • Press Releases
    • Transcriptome Sequenced
  • Events
    • Conferences
    • Meetings
    • Webinars
    • Workshops
    • Projects
    • Local Events
  • Jobs
  • Technology
    • Methods
      • Workflow
      • RNA Extraction
      • Library Preparation
      • Sequencing Protocols
      • Statistical Analysis
      • Data Analysis
        • Analysis Pipelines
        • Annotation
        • Clouding Platforms
        • Data Normalization
        • Data Sets
        • Data Visualization
        • Databases
        • Expression and Quantification
        • Other Tools
        • Pathway Analysis
        • SNP Detection
        • Splicing and Junction Mapping
        • Statistical Analysis
        • Transcriptome Assembly Tools
        • Unspliced Mapping Tools
    • New Products
      • Our Advertisers
    • Patents
    • Presentations
    • Publications
    • Review Publications
    • Web Tools
  • Data Analysis
    • Analysis Pipelines
    • Annotation
    • Clouding Platforms
    • Data Normalization
    • Data Sets
    • Data Visualization
    • Databases
    • Expression and Quantification
    • Other Tools
    • Pathway Analysis
    • SNP Detection
    • Splicing and Junction Mapping
    • Statistical Analysis
    • Transcriptome Assembly Tools
  • Blog
  • Reader Posts
  • Contact
    • Administration
    • Contribute News
    • Subscribe
    • Advertise
    • Request for RNA-Seq Services

Tag Archives: cheRNAs

Nuclear fractionation coupled to RNA sequencing reveals thousands of chromatin-associated human noncoding RNAs

August 17, 2015 Leave a comment 4,681 Views

rna-seq

A number of long noncoding RNAs (lncRNAs) have been reported to regulate transcription via recruitment of chromatin modifiers or bridging distal enhancer elements to gene promoters. However, the generality of these modes of regulation and the mechanisms of chromatin attachment ...

Read More »

Stay Connected

RNA-SEQ & COVID-19

Publications Trend

Recent RNA-SEQ Pubs

Transcriptomic analysis provides insights into candidate genes and molecular pathways involved in growth of Manila clam Ruditapes philippinarum
4 March 2021
De novo assembly of the transcriptome of scleractinian coral, Anomastraea irregularis and analyses of its response to thermal stress
4 March 2021
Nuclear RNA purification by flow cytometry to study nuclear processes in plants
4 March 2021
Co-expression of glutamatergic and autism-related genes in the hippocampus of male mice with disturbances of social behavior
4 March 2021
Data of de novo transcriptome assembly of the myxozoan parasite <em>Tetracapsuloides bryosalmonae</em>
4 March 2021
Circadian Gene Profiling in Laser Capture Microdissected Mouse Club Cells
4 March 2021

News in Pictures

rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq
rna-seq

recent visitors

Subscribe to the RNA-Seq Blog


Email Frequency

RNA-Seq Products & Services

Most Shared Posts

  • Surface-seq reveals nuclear-encoded RNA on the cell surface
    Google +1 logo   Twitter logo   Facebook logo
  • Single-cell RNA sequencing provides a breakthrough for tomorrow’s dentistry
    Google +1 logo   Twitter logo   Facebook logo
  • TransSynW – A single‐cell RNA‐sequencing based web application to guide cell conversion experiments
    Google +1 logo   Twitter logo   Facebook logo
  • SHARE-seq – measurement of chromatin accessibility and gene expression in the same single cell
    Google +1 logo   Twitter logo   Facebook logo
  • TISCH – a comprehensive web resource enabling interactive single-cell transcriptome visualization of tumor microenvironment
    Google +1 logo   Twitter logo   Facebook logo
  • Popular
  • Recent
  • Comments
  • rna-seq

    RPKM, FPKM and TPM, clearly explained

    July 22, 2015
  • rna-seq

    How to Analyze RNA-Seq Data?

    October 10, 2016
  • rna-seq

    Visualization of nucleotide substitutions in the (micro)transcriptome

    August 13, 2014
  • rna-seq

    Life Technologies Releases New Research Tool: Oncomine NGS RNA-Seq Gene Expression Browser

    April 8, 2014
  • rna-seq

    Comparison of TMM (edgeR), RLE (DESeq2), and MRN Normalization Methods

    October 6, 2016
  • rna-seq

    New algorithm identifies ‘escaping’ cells in single-cell CRISPR screens

    19 hours ago
  • rna-seq

    RNA sequencing brings hope for endangered wild cats

    20 hours ago
  • rna-seq

    Mim-tRNAseq – A method that accurately measures the abundance and modification status of different tRNAs

    2 days ago
  • rna-seq

    Uncovering the Anti-Myeloma Resistance Files

    2 days ago
  • Long term and short-term effects of RNA fixation on Single Cell RNA Sequencing

    3 days ago
  • RNA-Seq Blog: Thanks for letting us know. We have updated the link....
  • Yoni Sheinberger: The link doesn't work...
  • Ivan Molineris: If I understood well the annotation "ENSEMBL" used in this p...
  • Aashni: Nice article...
  • rna fixation: Wonderful article! We will be linking to this great article...

Categories

Archives

What is RNA-Seq?

long RNAs are first converted into a library of cDNA fragments through either RNA fragmentation or DNA fragmentation. Sequencing adaptors (blue) are subsequently added to each cDNA fragment and a short sequence is obtained from each cDNA using high-throughput sequencing technology. The resulting sequence reads are aligned with the reference genome or transcriptome, and classified as three types: exonic reads, junction reads and poly(A) end-reads. These three types are used to generate a base-resolution expression profile for each gene. Nat Rev Genet 10(1):57-63 (2009)


RNA-Seq

Recent News

  • rna-seq

    New algorithm identifies ‘escaping’ cells in single-cell CRISPR screens

    19 hours ago
  • rna-seq

    RNA sequencing brings hope for endangered wild cats

    20 hours ago
  • rna-seq

    Mim-tRNAseq – A method that accurately measures the abundance and modification status of different tRNAs

    2 days ago
  • rna-seq

    Uncovering the Anti-Myeloma Resistance Files

    2 days ago
  • Long term and short-term effects of RNA fixation on Single Cell RNA Sequencing

    3 days ago
  • rna-seq

    Single cell RNA sequencing opens new avenues for eradicating leukaemia at its source

    3 days ago
  • rna-seq

    2passtools: two-pass alignment using machine-learning-filtered splice junctions increases the accuracy of intron detection in long-read RNA sequencing

    3 days ago

Subscribe to the RNA-Seq Blog


Email Frequency

Social Networking Pages


RNA-Seq
  • 6,566 Followers
  • 2,079 Fans
© Copyright 2009-2020, All Rights Reserved. | Designed by Go Big - Online Presence Creations