FusionScan – prediction of fusion genes from RNA-Seq data

October 16, 2019 Leave a comment 2,566 Views

Identification of fusion gene is of prominent importance in cancer research field because of their potential as carcinogenic drivers. RNA sequencing (RNA-Seq) data have been the most useful source for identification of fusion transcripts. Although a number of algorithms have ...

Acfs – circRNA identification and quantification from RNA-Seq data

December 12, 2016 Leave a comment 4,441 Views

Circular RNAs (circRNAs) are a group of single-stranded RNAs in closed circular form. They are splicing-generated, widely expressed in various tissues and have functional implications in development and diseases. To facilitate genome-wide characterization of circRNAs using RNA-Seq data, researchers from ...

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Tag Archives: chromosomal translocation

FusionScan – prediction of fusion genes from RNA-Seq data

Acfs – circRNA identification and quantification from RNA-Seq data

Single-cell Stereo-seq reveals induced progenitor cells involved in axolotl brain regeneration

Element Biosciences delivers 1 billion reads and provides industry’s lowest cost for single-cell sequencing

ShIVA – A user-friendly and interactive interface giving biologists control over their single-cell RNA-seq data

Single-cell RNA sequencing provides valuable for insight into the development of bubonic plague and host immune response

Machine learning for cell type classification from single nucleus RNA sequencing data

Pseudotime simulates disease progression from case-control RNA-Seq

SHERRY2 – a specifically optimized protocol for scRNA-seq without second strand cDNA synthesis