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Tag Archives: Contamination identification

RNA-QC-chain – comprehensive and fast quality control for RNA-Seq data

February 20, 2018 Leave a comment 5,292 Views

rna-seq

RNA-Seq has become one of the most widely used applications based on next-generation sequencing technology. However, raw RNA-Seq data may have..

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Recent RNA-SEQ Pubs

Human ORC/MCM density is low in active genes and correlates with replication time but does not delimit initiation zones
8 March 2021
Therapeutic implications of <em>C. albicans-S. aureus</em> mixed biofilm in a murine subcutaneous catheter model of polymicrobial infection
8 March 2021
Sex-Specific Control of Human Heart Maturation by the Progesterone Receptor
8 March 2021
Eleven biosynthetic genes explain the majority of natural variation in carotenoid levels in maize grain
8 March 2021
Knowledge-based classification of fine-grained immune cell types in single-cell RNA-Seq data
8 March 2021
A de Novo Transcriptome Assembly of Ceratopteris Richardii Provides Insights into the Evolutionary Dynamics of Complex Gene Families in Land Plants
8 March 2021

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What is RNA-Seq?

long RNAs are first converted into a library of cDNA fragments through either RNA fragmentation or DNA fragmentation. Sequencing adaptors (blue) are subsequently added to each cDNA fragment and a short sequence is obtained from each cDNA using high-throughput sequencing technology. The resulting sequence reads are aligned with the reference genome or transcriptome, and classified as three types: exonic reads, junction reads and poly(A) end-reads. These three types are used to generate a base-resolution expression profile for each gene. Nat Rev Genet 10(1):57-63 (2009)


RNA-Seq

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    Learn more about available bioinformatics tools and pipelines to analyze RNA sequencing data

    4 days ago
  • rna-seq

    New search engine for single cell atlases

    4 days ago
  • rna-seq

    Yale researchers identify tumor reactive immune cells with RNA sequencing to help fight against advanced melanoma

    4 days ago
  • rna-seq

    New algorithm identifies ‘escaping’ cells in single-cell CRISPR screens

    5 days ago
  • rna-seq

    RNA sequencing brings hope for endangered wild cats

    5 days ago
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    Mim-tRNAseq – A method that accurately measures the abundance and modification status of different tRNAs

    6 days ago
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    Uncovering the Anti-Myeloma Resistance Files

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