Tag Archives: cummerbund

The recent advances in high throughput RNA sequencing (RNA-Seq) have generated huge amounts of data in a very short span of time for a single sample. These data have required the parallel advancement of computing tools to organize and interpret ...

by Stephen Turner Overview of RNA-seq quality control and data analysis using TopHat, Cufflinks, and CummeRbund. Given at the CSHL DNA Learning Center RNA-seq for the Next Generation (http://www.rnaseqforthenextgeneration.org/)

Import a CummeRbund database object into R from cuffdiff output using galaxy and produce some basic plots.