Tag Archives: DEGs

With new technological developments, the number of sequencing applications is continuously expanding, while at the same time sequencing prices are falling. This is resulting in an exponential increase in sequencing data. However, while ‘big data’ brings more...

The correct identification of differentially expressed genes (DEGs) between specific conditions is a key in the understanding phenotypic variation. High...

Researchers from the the Georgia Institute of Technology compare methods for filtering RNA-seq low expression genes and investigate the effect of filtering on detection of differentially expressed genes (DEGs). Although RNA-seq technology has improved the dynamic range of gene expression ...

For plant species with unsequenced genomes, cDNA contigs created by de novo assembly of RNA-Seq reads are used as reference sequences for comparative analysis of RNA-Seq datasets and the detection of differentially expressed genes (DEGs). Redundancies in such contigs are ...

Recent advances in next-generation sequencing technology allow high-throughput cDNA sequencing (RNA-Seq) to be widely applied in transcriptomic studies, in particular for detecting differentially expressed genes between groups. Many software packages have been developed for the identification of differentially expressed genes ...