Analysis and prediction of exon skipping events from RNA-Seq with sequence information using rotation forest

December 13, 2017 Leave a comment 8,072 Views

In bioinformatics, exon skipping (ES) event prediction is an essential part of alternative splicing (AS) event analysis. Although many methods have been developed to predict ES events, a solution has yet to be found. In this study, given the limitations ...

Veridical – Validation of predicted mRNA splicing mutations using high-throughput transcriptome data

March 7, 2014 1 Comment 8,767 Views

Interpretation of variants present in complete genomes or exomes reveals numerous sequence changes, only a fraction of which are likely to be pathogenic. Mutations have been traditionally inferred from allele frequencies and inheritance patterns in such data. Variants predicted to ...

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Tag Archives: exon-skipping

Analysis and prediction of exon skipping events from RNA-Seq with sequence information using rotation forest

Veridical – Validation of predicted mRNA splicing mutations using high-throughput transcriptome data

scMEB – a fast and clustering-independent method for detecting differentially expressed genes in single-cell RNA-seq data

Researchers weave deeper understanding of diverse ancestry and gene expression

ExpressAnalyst – a unified platform for RNA-sequencing analysis in non-model species

Celloscope – a probabilistic model for marker-gene-driven cell type deconvolution in spatial transcriptomics data

gExcite – a start-to-end framework for single-cell gene expression, hashing, and antibody analysis

RNA-Seq reveals orchids’ ability to grow on other plants independently evolved multiple times

New RNA sequencing method reveals bacterial reaction to antibiotics in five minutes