Tag Archives: genepattern

This is a recording of our Recipe Webinar, “Find differentially expressed genes in RNA-Seq data”. The video recording has been transcribed, and can be accessed by enabling subtitles/closed captioning on the video. We received several questions during our Question & ...

In this video step, we will run a previously constructed GenePattern pipeline for analyzing RNA-Seq data. Our pipeline is named RNA_exp. To run it, we start from the pipeline run-page which lists the necessary input files just like a module ...

This tutorial covers common quality control metrics that can be used for evaluating aligned RNA-seq data files in GenePattern