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Tag Archives: genomic analyses

NCBI to hold three-day genomics hackathon in January

November 17, 2015 Leave a comment 2,841 Views

rna-seq

From January 4th to 6th, NCBI will host a genomics hackathon focusing on advanced bioinformatics analysis of next generation sequencing data. This event is for students, postdocs and investigators already engaged in the use of pipelines for genomic analyses from ...

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Recent RNA-SEQ Pubs

ROS-Induced Hepatotoxicity under Cypermethrin: Involvement of the Crosstalk between Nrf2/Keap1 and NF-κB/iκB-α Pathways Regulated by Proteasome
12 April 2021
Dataset of the transcriptomes of <em>Urechis unicinctus</em> to identify differentially expressed genes (DEGs) under different temperature and exposure to open air
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Protective effects and molecular mechanisms of <em>Achyranthes bidentata</em> polypeptide k on Schwann cells
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Single Cell Label-Free Probing of Chromatin Dynamics During B Lymphocyte Maturation
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Transcriptomic Changes Induced by Deletion of Transcriptional Regulator <em>GCR2</em> on Pentose Sugar Metabolism in <em>Saccharomyces cerevisiae</em>
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Editorial: Genomic Characterization of Emerging Human Fungal Pathogens
12 April 2021

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What is RNA-Seq?

long RNAs are first converted into a library of cDNA fragments through either RNA fragmentation or DNA fragmentation. Sequencing adaptors (blue) are subsequently added to each cDNA fragment and a short sequence is obtained from each cDNA using high-throughput sequencing technology. The resulting sequence reads are aligned with the reference genome or transcriptome, and classified as three types: exonic reads, junction reads and poly(A) end-reads. These three types are used to generate a base-resolution expression profile for each gene. Nat Rev Genet 10(1):57-63 (2009)


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    Post-doc position available – transcriptome bioinformatics and RNA sequencing

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