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Tag Archives: Horizon 2020

In Situ RNA Sequencing (ISS) technology will be applied to spatially map cell types for international Human Cell Atlas initiative

January 24, 2020 Leave a comment 2,045 Views

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The European Union’s Horizon 2020 funding program has confirmed support for six pilot European Human Cell Atlas projects designed to contribute to the international Human Cell Atlas initiative (HCA) with studies of the brain, uterus, lung, pancreas and...

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RNA-SEQ & COVID-19

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Recent RNA-SEQ Pubs

Schistosoma mansoni alter transcription of immunomodulatory gene products following in vivo praziquantel exposure
3 March 2021
Establishment of a Cuscuta campestris-mediated enrichment system for genomic and transcriptomic analyses of 'Candidatus Liberibacter asiaticus'
3 March 2021
The transcriptome characteritics of vestibular organs from delayed endolymphatic hydrops patients(Menieres disease)
3 March 2021
Effects of neonatal exposure to methoxychlor on corpus luteum in gilts: A transcriptomic analysis
3 March 2021
Transcriptomic and physiological responses of the tropical reef calcified macroalga Amphiroa fragilissima to elevated temperature
3 March 2021
The type 2 asthma mediator IL-13 inhibits SARS-CoV-2 infection of bronchial epithelium
3 March 2021

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What is RNA-Seq?

long RNAs are first converted into a library of cDNA fragments through either RNA fragmentation or DNA fragmentation. Sequencing adaptors (blue) are subsequently added to each cDNA fragment and a short sequence is obtained from each cDNA using high-throughput sequencing technology. The resulting sequence reads are aligned with the reference genome or transcriptome, and classified as three types: exonic reads, junction reads and poly(A) end-reads. These three types are used to generate a base-resolution expression profile for each gene. Nat Rev Genet 10(1):57-63 (2009)


RNA-Seq

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  • rna-seq

    New algorithm identifies ‘escaping’ cells in single-cell CRISPR screens

    13 hours ago
  • rna-seq

    RNA sequencing brings hope for endangered wild cats

    14 hours ago
  • rna-seq

    Mim-tRNAseq – A method that accurately measures the abundance and modification status of different tRNAs

    2 days ago
  • rna-seq

    Uncovering the Anti-Myeloma Resistance Files

    2 days ago
  • Long term and short-term effects of RNA fixation on Single Cell RNA Sequencing

    2 days ago
  • rna-seq

    Single cell RNA sequencing opens new avenues for eradicating leukaemia at its source

    3 days ago
  • rna-seq

    2passtools: two-pass alignment using machine-learning-filtered splice junctions increases the accuracy of intron detection in long-read RNA sequencing

    3 days ago

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