RNA-Seq Blog Transcriptome Research & Industry News
Several state-of-the-art methods for isoform identification and quantification are based on l1-regularized regression, such as the Lasso. However, explicitly listing the-possibly exponentially-large set of candidate transcripts is intractable for genes with many exons. For this reason, existing approaches using the ...
Read More »FlipFlop – Efficient RNA Isoform Identification and Quantification from RNA-Seq Data with Network Flows
